Gene Swoo_1074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1074 
Symbol 
ID6115308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand+ 
Start bp1392769 
End bp1393320 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content46% 
IMG OID641632557 
Productcytochrome c, class I 
Protein accessionYP_001759462 
Protein GI170725436 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.137928 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCGA CTTGTTTTAA CTCTATCTAT GCAGCCCTTA TTTTAATTGG ACTCGCTACT 
CCTGTTCTCG CACAGGAGAT CTTCTCTCCC AGTGTGGACA AGAGTGGAAA TATCAGTTTC 
CCAGCCGATT ACCGCAGTAC TATGGAGCAT TTAGGTTCAT GGTTTGTTCC GACGGGGGGA 
GCCAGTGGTT TTCACCATGT CTATACCGAG ATGGAGAGCG TCGAGTACTT CCAAAAAAAC 
GGTGTTTTCC CCGATGGCGC GGTTTTGGTA AAAGAGCTGT TAGTTTCTGA GGCGAATAAT 
TACACCACTG GAGAGGGAGT ACACTCAGCT AATGGCGAGT ATAAGCAGTG GTTTGTGATG 
GTAAAAGACA GTCAAAACCG TTTTACCGAT AATCCTGTTT GGGGAGATGG TTGGGGTTGG 
GCCCTATTTA AACCAGGCAA TACCAGTAAA AACCTGGCAA CCGATTATAA GAAAGACTGC 
TTAGCCTGCC ACGTTCCAGC TAAGGGAACT GATTGGATCT ATACCCAAGC TTATCCCGCT 
TTAAGTGAAT AA
 
Protein sequence
MKATCFNSIY AALILIGLAT PVLAQEIFSP SVDKSGNISF PADYRSTMEH LGSWFVPTGG 
ASGFHHVYTE MESVEYFQKN GVFPDGAVLV KELLVSEANN YTTGEGVHSA NGEYKQWFVM 
VKDSQNRFTD NPVWGDGWGW ALFKPGNTSK NLATDYKKDC LACHVPAKGT DWIYTQAYPA 
LSE