| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1072 |
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| Symbol | |
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| ID | 6115306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1391109 |
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| End bp | 1392059 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641632555 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001759460 |
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| Protein GI | 170725434 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0532513 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCAAAG AAGGTTCTCA TCGGCTCAAA AAACAAGATT CAACCTTTGA TATTCTCGAT
GATGTCATTG CAACCTTAAG ATTTCGTGGC AGTATCTTTT TCCACTCAGA CCTTGCAGCC
CCTTGGGGGA TCTCACTTCC TCCCCTGCCC ACCCCTAGAT TTCATATCGC GCTTCATGGC
GACTTTGTGA TAGGCACAAG TGAAGCGCAA CTGCCGATAA TGCAGATGGA CATAGTCATG
CTCCCTAAAG GAGATATGCA TTGGATAGCC GATGAAACAA GCAGCGAATT AGTCCCTTGC
CAGTTAGCTG GTGATGCCTG CGAGCTAGGT AACCCGCTGT TTCAAGAGGG GGAGATCACA
AACCGTATCA TGTGTGGCAT GGTTGAGTAT GATGAAGCTA TCTCGCACCC TATTTTGGAT
GCGCTTCCAA GCATCTTTCA CTTTACTCAC ATTGAAGTCG ATAACCCGAT CTGGACAACT
GTTCGACAGA TCGATAGTGA AATTCAACGC ACAAACAGTC AAAGAAGCGT GATTATCGAT
CGTTTAACAG AGGTGCTTTT TTTCCAGTTA TTACATAGAT ATATCGCAGA AAATGAGCAT
CTTCATGGTT TTCTAGCCGC ACTGCGCAAC CCACGTCTGG CGAAAGTGCT GCAACTACTC
CATGATAATC CTGAAAAGCC TTGGACCTTA GCGACTATCT GTAATGAGGC GGGTATGTCC
AGAGCAAGCC TACAACGTAA ATTTAAGGCT GAGCTTGACC TCTCACCCAT GGCCTACCTT
GGCAGTTGGA GGCTAGCTAA AGCTTATCAA CTGGTGAAAA ATTCAAGTCT AACGCTGGAT
AATATTGCCG ATAGAATAGG ATACGCAGAT GCCAGAACCT TACGTGCAGC ATTCAAGCGC
CACTATGGGT TTAGCCCGAG CGCTTTAAGA AAAGGTGATA GCGAAGTTTA A
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| Protein sequence | MLKEGSHRLK KQDSTFDILD DVIATLRFRG SIFFHSDLAA PWGISLPPLP TPRFHIALHG
DFVIGTSEAQ LPIMQMDIVM LPKGDMHWIA DETSSELVPC QLAGDACELG NPLFQEGEIT
NRIMCGMVEY DEAISHPILD ALPSIFHFTH IEVDNPIWTT VRQIDSEIQR TNSQRSVIID
RLTEVLFFQL LHRYIAENEH LHGFLAALRN PRLAKVLQLL HDNPEKPWTL ATICNEAGMS
RASLQRKFKA ELDLSPMAYL GSWRLAKAYQ LVKNSSLTLD NIADRIGYAD ARTLRAAFKR
HYGFSPSALR KGDSEV
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