Gene Swoo_0984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0984 
Symbol 
ID6115218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1295137 
End bp1296426 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content46% 
IMG OID641632467 
Producthypothetical protein 
Protein accessionYP_001759372 
Protein GI170725346 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.136767 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGT TAACACATTT AGCCACATCC CTAGCCATGG CAAGCTTATT GGTCGCCTGT 
CAGGATGACG CCCAAACTGA AGAACCACAA GCAGAAGTGA CTAAACAGCA AACAAAAAGC
TTCACCCTTG CAGCACCTCA AACAGGTGAC TTTAGTTCAA CTGAGATCAA TGAGCCCACG
CTTCCCCCCA TCAACAGCAG CCCTGAAGCG GTTAGCTTTG TCACAAAAGT TTCATCAGAC
TTTACGCTCA CGCCACCTGT AAGAGCCCGC TCAGTTCAAA GTGATGAGTA TTGGACTAAG
GTAACTGGCG ATGAGCTAAA TCGCGGTGTT AAATTAGCAA TAAGCCAAGC ATCCAGTGTT
ATTCGTATCT CCCCAAGAGG CGACACAAGC TCAGGAACAT TAACCCATAG TAAAGCAATT
GAACCTGAAA CGATTCAGCT GCTCAAAGAG GGAGCTAAAG AGAGTCAAAG TCGCTCATAC
ATAAAGTCAC TGGCAGACTC GCAAGCTCTG GCCACTGCAG GTCTAACAGA TGACTCCAGC
GCCTTAATAC TCTCCTCAGA TGCAACCGCA GGCCAATATC GATTGAAAGT AAGCGAGAAG
CTCGAACCCG ACGCCAGCTA TATGGTGAAT GTGAAAGAGA AACACTCCCC TTACAAACTA
AAACTCACTA GCAAAGATAG CCTTTCTTCA GCTCAAACCT CAATGCCATT TCAACTTGAG
CTAAGTAATA ATCAAACTCA GTTAAAGCCC AAAGCAAGCC TTAAACACGC AAATGGCCAC
TATCAAGCAC TAGAAGTTGA GCAGGTTAAT GGCCAGTGGA GCGCCAAGCT ACCTGAACTT
GATGCTATGC CTGTCAGCAA CTCAGGTCTG AGTGAGATCC AACTCGAAGT GCAAACCGAT
GTTGCAGGTG AACAGGTGAT CAGAACCGTT AAAAAAGCCT TTAAACAGTT TGTGCCATCG
GCAAAGATTC AGCCAGAGGT GTCTACAAGT TGGGAGCAAG GAGTACCTAG CTCACTCACA
GTAAGTTTAG AGATGAAAAA AGCGGGACGT TTCTCTGTTG CAGGCTTTCT GACTGGGGTC
GATACCCAAG GTAATGATAA ACCAATCCTA AGAACTGAAT CTGCCGATTG GTTAACGCCT
GACTCGACTA AACTCACCTT AAAACTAGAC ACACAGCTCA TTGCTCAGTC TGGTTTAAAG
CCTCCCTATA AGTTACAAGG GTTAACCCTT AAAGATCAGG GACAGATGGC AAGGCTAAGC
TACCAAGCCC ATGGAGTGAC ATTGAACTAA
 
Protein sequence
MKKLTHLATS LAMASLLVAC QDDAQTEEPQ AEVTKQQTKS FTLAAPQTGD FSSTEINEPT 
LPPINSSPEA VSFVTKVSSD FTLTPPVRAR SVQSDEYWTK VTGDELNRGV KLAISQASSV
IRISPRGDTS SGTLTHSKAI EPETIQLLKE GAKESQSRSY IKSLADSQAL ATAGLTDDSS
ALILSSDATA GQYRLKVSEK LEPDASYMVN VKEKHSPYKL KLTSKDSLSS AQTSMPFQLE
LSNNQTQLKP KASLKHANGH YQALEVEQVN GQWSAKLPEL DAMPVSNSGL SEIQLEVQTD
VAGEQVIRTV KKAFKQFVPS AKIQPEVSTS WEQGVPSSLT VSLEMKKAGR FSVAGFLTGV
DTQGNDKPIL RTESADWLTP DSTKLTLKLD TQLIAQSGLK PPYKLQGLTL KDQGQMARLS
YQAHGVTLN