| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0949 |
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| Symbol | |
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| ID | 6115183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1258247 |
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| End bp | 1260172 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641632432 |
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| Product | peptidase U32 |
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| Protein accession | YP_001759337 |
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| Protein GI | 170725311 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAG CTACCATCTT TACCCCTGAC GATGTGTCGC ATATATCAAA CCGTTTAGAA
CTGCTTGCCC CAGCAAAAAA TGCTGAGTTT GGTATGGAAG CGATTCTGCA TGGTGCCGAT
GCGGTATACA TTGGCGGGCC TGAATTTGGT GCACGCGCAA CCGCGGGGAA CAGTGTTGAG
GATATTGCTC GGCTCTGTGC TTTCGCCCAT AAATACCATG CTCAGGTTTT TGTCGCTATC
AATACCATCT TGATGGATGA CGAACTTGCT GGTGCTGAAA AGTTGATCTG GCAAGTGTAC
GAGGCGGGAG CGGACGCGCT TATTGTCCAA GATATGGGCG TGCTTCAGCT CGACCTTCCT
CCTATTGCTC TGCATGCCAG TACTCAGATG GATAACCGCA CTGCAGAGAA AGCGGTATTT
TTAGAGCAGG TGGGCTTCTC TCAGGTGGTG CTCGCTCGTG AGCTGGGTTT AAGTCAGATC
CGTGAAGTGG CAGCGCACAC TAAGATGCAG CTTGAGTTCT TTATCCATGG TGCGCTCTGT
GTGGCCTATT CAGGTTTGTG TAATTTAAGT CATGCCTTTA GTAATCGCAG TGCTAACCGA
GGTGAGTGTT CTCAGATGTG TCGCTTGCCG GGTGAACTTA AGACCCGACA AGGTGAAGTG
CTTGCCGAAA ATGAGCATCT GTTGTCCCTT AAAGATAATA ACCAGACGGA CAACCTTGAA
GCCTTAATTG ATGCGGGGGT TCGCTCATTT AAGATTGAAG GGCGCCTGAA AGATATTAAC
TATGTGAAAA ATGTCACCGC GCATTACCGT CAAGAACTGG ATAAGATCAT CGCCCGTCGC
CCAGAGCTTA AGGCGTCATC CCATGGTCGT TCACTGCACA CCTTTACTCC CAATGTTGAG
AAGACATTTA ACCGTGGCCG TACCGATTAC TTTGTGAATG AACGTAGCCA AGGTGTGAGT
GATTTCCGCT CTCCTAAATA TATTGGTGAA GAGGTTGCGA CAGTCAAACG TCTTGGTAAA
GACTTTATTG AACTGGAGTC GACGCATACC TTTAATAACG GTGATGGCCT CTGTTATTTT
CCTGCCAATT ACACTAAAGC CAAACAGTCT GATGACAAGT TACAAGGGTT GCGAGTCAAC
CGCGCTGAGG GGTTAAAACT GCATGTGTTA ACGGTGCCTG GCGATCTTGA AGTGGGCATG
ACTATCTACC GAAATCGTGA CCAAGCCTTT GAGGCAGTAC TTGCCAAAGA GTCCTCTAAA
CGCTCAATTG ATGTCGATAT CGTGATTGCT GATACCAGTG ATGGCATCAA GATGACCATG
ACCGATCTGT ATGGTCATCA AGGTGAGGTG AGCTTAGTCA TGGATAAGCA GCCGGCGAAC
GACCAAGAGT CCGCCAGCGG TAAGTTACGC AAACAGCTGG CAAAACTAGG CAGTACCGAT
TTTGTGGCCA GAAAGGTAAG TATTGAAACT GAGCTGATCT GGTTTGCACC AGCATCTGTC
ATCAATGGAC TTCGCCGTGA TACCGTAGCC GCACTTGAAA AAGCCCGGGT TGATGAGTAT
CAAAGACCTA AGCCTTGGAA GCATAATCAA GACGCTATGT ATCCTACTAA GCATCTGAGT
TATCTCGCTA ATGTGGCAAA TCAAAAATCG AAAGATTTTT ATCAGCAGCA TGGTGTGATT
GAGATTGAAG ATACCTATGA GAAGAACGGG ATAACAGAGG AGGTGCCCCT AATGGTCACT
AAACACTGTT TACGTTTTAA CTTTAATCTC TGCCCTAAAG AGGTCCCAGG GATAAAAGCT
GAACCTATGG TGCTTGAGAT CGGTAAAGAT GTATTGAAGT TGGTTTTCGA TTGCCCTAAG
TGTGAAATGC TAGTGGTAGG TGCCAACCGT CAGGTTAAGA GCGACGGCAG AGAAGTCGTG
AACTAG
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| Protein sequence | MSKATIFTPD DVSHISNRLE LLAPAKNAEF GMEAILHGAD AVYIGGPEFG ARATAGNSVE
DIARLCAFAH KYHAQVFVAI NTILMDDELA GAEKLIWQVY EAGADALIVQ DMGVLQLDLP
PIALHASTQM DNRTAEKAVF LEQVGFSQVV LARELGLSQI REVAAHTKMQ LEFFIHGALC
VAYSGLCNLS HAFSNRSANR GECSQMCRLP GELKTRQGEV LAENEHLLSL KDNNQTDNLE
ALIDAGVRSF KIEGRLKDIN YVKNVTAHYR QELDKIIARR PELKASSHGR SLHTFTPNVE
KTFNRGRTDY FVNERSQGVS DFRSPKYIGE EVATVKRLGK DFIELESTHT FNNGDGLCYF
PANYTKAKQS DDKLQGLRVN RAEGLKLHVL TVPGDLEVGM TIYRNRDQAF EAVLAKESSK
RSIDVDIVIA DTSDGIKMTM TDLYGHQGEV SLVMDKQPAN DQESASGKLR KQLAKLGSTD
FVARKVSIET ELIWFAPASV INGLRRDTVA ALEKARVDEY QRPKPWKHNQ DAMYPTKHLS
YLANVANQKS KDFYQQHGVI EIEDTYEKNG ITEEVPLMVT KHCLRFNFNL CPKEVPGIKA
EPMVLEIGKD VLKLVFDCPK CEMLVVGANR QVKSDGREVV N
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