| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0945 |
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| Symbol | |
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| ID | 6115179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1253205 |
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| End bp | 1254596 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641632428 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001759333 |
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| Protein GI | 170725307 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.36887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGAGA CGAATAGCAT AAAATGTAAG TTTTGTTGCA GGGTCTTCGA TGATTATACT
TTTATGAGTA TTTATGTAGC GTTTATTATC AATGTTGTTC TTTTTTCTGC TTTTCCATTG
CTTCTGTCTA CTCTGCAACC AGTTATGCGC CGAATTGGTT TCTACTCATA CTTGAGTGTC
ATTTTGGTGA TAGGTGGTGT GTTAGGCAGC CTATATTCGT TTCAACTGGC AGATAATATC
TACCTGTCTG GGGGGAATTT AGCCTACGGC TCCTTTATGA TGTCGGCGGT TATGCTGTTT
ATCATGGAAC GAAAGGTTCT CATCTTTAAC TACCTGATAA AACTTCTTGT TTTTATCAAC
CTATTTGTGT TTTTTGGCTT TAATTTTATC TTGTACATTT TAGAAAACGC CCTCGTTATA
AATCCATTTA ATGTTGATGC TAAATTATTT GATACCTCGT TAGGTGTTTT ACTCCTTGGT
GGTGCTTTGA TAGCCACTGA GTTTTTAATT TTGATGCAGA TCTTTATTAA AGTTAAGGAT
AGGATCAGTA ATCTTAAGCA GCTGATGATG CTCTACTCTT TCGTGTTTAT TTTGGTCATA
TGTCTTGATG GGGTGTTATT TCCCCTTATT GCGATTGGTG TCTCCCCTGA GTTACTGCCG
ATAATGATAA GTAACCTGAG CGGTAAGCTT ATTTTGGCTC TCTCTTTTAG TGTTCCTTTG
TTTGTTTTCT ACTGCCTATA CCAAAATAAA CTGAATCGCT TTGTCGATAC GCCAATGGCC
TTGAGTACGG TCTTTTTTGA ATCTCGAGTT AGACTGACTC TCGAGCTCGA TAAGCTGGAG
AGGGCTGCAA AACAGCTCAT TGATGATAAT CAGAAACTGA TAAACCTCTC CCATTATGAT
CACTTAACCG GATTGGCGAA CAGGCGTAAG TATGATGATT ATGCGAGTGC TTTATACACA
AGAGCTGTTG AGTTAGGAGA GCCTGTCACC TTAGTACTTG GGGATATTGA TCACTTTAAA
AAATATAATG ACTTTTACGG CCATCAATCA GGTGATGAGT GTTTGCAAAG GGTTGCTGAA
TTTTGGAAAG AGATACTCCT AGAGGAGGAG CGCTTAACCG CTAGAATCGG AGGTGAAGAG
TTTGCTGTCA TAATTGCCAA CCGAACTGCA GAGGCAATTT TACCTCAATT AAAGCGAGAT
ATTGCAGGTT TAACGGCACT TGCTATTCCC CATGCCGCTT CTTCCACCGC CTCGATTGTC
ACTATGAGTA TAGGTGTCGC AAGCATGCTA CCCAGCAGAG AAGGAGATTT TGAGCTGCTG
TTCGAAACGG CTGATAAGGC GCTTTATCAA GCTAAAAACT CAGGACGTAA CCAGATCTCA
ACCTTAAACT GA
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| Protein sequence | MPETNSIKCK FCCRVFDDYT FMSIYVAFII NVVLFSAFPL LLSTLQPVMR RIGFYSYLSV
ILVIGGVLGS LYSFQLADNI YLSGGNLAYG SFMMSAVMLF IMERKVLIFN YLIKLLVFIN
LFVFFGFNFI LYILENALVI NPFNVDAKLF DTSLGVLLLG GALIATEFLI LMQIFIKVKD
RISNLKQLMM LYSFVFILVI CLDGVLFPLI AIGVSPELLP IMISNLSGKL ILALSFSVPL
FVFYCLYQNK LNRFVDTPMA LSTVFFESRV RLTLELDKLE RAAKQLIDDN QKLINLSHYD
HLTGLANRRK YDDYASALYT RAVELGEPVT LVLGDIDHFK KYNDFYGHQS GDECLQRVAE
FWKEILLEEE RLTARIGGEE FAVIIANRTA EAILPQLKRD IAGLTALAIP HAASSTASIV
TMSIGVASML PSREGDFELL FETADKALYQ AKNSGRNQIS TLN
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