| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0941 |
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| Symbol | |
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| ID | 6115175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1249601 |
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| End bp | 1250686 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641632424 |
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| Product | L-sorbosone dehydrogenase, putative |
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| Protein accession | YP_001759329 |
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| Protein GI | 170725303 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0785845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGATCAC TATTAATCCC AATCGCTATC CTCTTTTCCA ATATCAGCCA TTCGCTCCCT
TTAGAGAAGA TCACCCTCCC CCCAGATTTT AAGATAGAGC TTTACGCAAA AGGTGTTGAT
AATGCCCGTC AGATGGCTTT AGGCGATAAA GGCACTCTGT TTGTGGGAAG TCGTAAGGAG
GGAAAGGTTT ATGCTTTAAT AGACAATGAT GGGGATTATA AAGCCGATAA GGTTATTGAT
ATCGCAAGTA AGCTCTTTAT GCCCTCCGGT ATCGCTTATC ACCAAGGTGA CCTCTATGTG
GCAGAAGTCG ATAAAATATG GCGCTATTCC AATATAGAGG CCTCACTACC TAGCGTACCG
ACGCCGGAGC TTGTATATGG TAAGCTTCCT AATAAATCCC ACCATGGCTG GAAATTTATC
GCATTCGGTC CCGATGGTAA GCTCTATATT CCCGTCGGTG CTCCCTGTAA TGTGTGCGAA
AGTGAACTCC CTTTTGCCAC TATCCTAAAA CTAGATACAG TGACAAAAAA CAGCAAAATT
GTCGCGACAG GTGTCAGAAA CAGTGTCGGC TTTGACTTCC ATCCTAAAAC AGGGGATTTA
TGGTTTACCG ATAATGGCAG AGATATGATG GGAGATGACC TTCCCGATGA TGAGCTCAAC
CATGTGTCGA AAGAGGGACA ATTTTTTGGT TTTCCCTATA TCCATAATGA CGATATTCAC
GATCCCAAAT TTACCTCCCC AGAGAAAGCC AAACACAATC GCAAACCCGC ACTAAAGCTA
GGTGCCCATG TGGCCGCCTT AGGTATGGAG TTTTACCAAG GAAAACAGTT CCCAGCTGAG
TACCAAAACA ATATTTTTAT CGCCGAACAT GGCTCCTGGA ATCGAAGTAA AAAGGTAGGT
TACCGCATCG TCCGTGTGGT GCTTGAAGGC GACAGAGTCG TTAACTCAGA GGTGTTTGCA
TCTGGCTGGC TACAGGGAGA GGAGAGTTGG GGGCGCCCCG TCTCTGTGCT CACTTTGCCT
GATGGCTCTT TGTTAGTATC AGATGATGCA GCGGATGCTA TCTACCGGAT TAGCTATGAA
AAGTAA
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| Protein sequence | MRSLLIPIAI LFSNISHSLP LEKITLPPDF KIELYAKGVD NARQMALGDK GTLFVGSRKE
GKVYALIDND GDYKADKVID IASKLFMPSG IAYHQGDLYV AEVDKIWRYS NIEASLPSVP
TPELVYGKLP NKSHHGWKFI AFGPDGKLYI PVGAPCNVCE SELPFATILK LDTVTKNSKI
VATGVRNSVG FDFHPKTGDL WFTDNGRDMM GDDLPDDELN HVSKEGQFFG FPYIHNDDIH
DPKFTSPEKA KHNRKPALKL GAHVAALGME FYQGKQFPAE YQNNIFIAEH GSWNRSKKVG
YRIVRVVLEG DRVVNSEVFA SGWLQGEESW GRPVSVLTLP DGSLLVSDDA ADAIYRISYE
K
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