Gene Swoo_0935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0935 
Symbol 
ID6115169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1238628 
End bp1239803 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content47% 
IMG OID641632418 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001759323 
Protein GI170725297 
COG category[C] Energy production and conversion 
COG ID[COG0578] Glycerol-3-phosphate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGAT TCGATCTCGT TATCATAGGT GGTGGTATCA ATGGGGCGGG CATAGCTCAG 
TGCGCCTCTG CGGCAGGATT TAGCGTACTG CTCCTTGAAA AGGGCGAGAT TGCTGAACAA
ACATCGGCTA ATTCGAGTAA GTTAATTCAT GGTGGGTTGA GGTATCTTGA GTCTGGTCAG
CTCTCTTTGG TTAGAAAGTC TCTCTCTGAA CGTCGCGCAT TGCTCAAACT GGCCCCCAAT
TTAGTCAAAC CTATCCCTTT TTATATCCCT GTTTATGAAA ATAGCCAGCG AAGTCAGTGG
GCAATACGCG CAGGGTTGAG TGCCTACGCC CTGCTTAGTG AGTTGGATCC TTTAGGTCAG
TTTAAGAGCC TTCCTGCGGT TCAATGGCCG AATATTAAGG GGTTAAAATT ACAGGGCTTA
GAGGCTGTTT TTCAATACTG GGATGCGCAA ACAGATGATA AAGCGCTGAC AAAATCTGTG
GTGCGAAGTG CTGTAGAGTT AGGGGCTAAA GTATTACAAG GTGCTGAGTG CGATGCACTT
GTACATAGAC CTGACCATTG TGAAGTGAGT TACCTTTATC AAGATGAGCG CTGCAAAGTA
ACGGCTTCGT GTGTTGTTAA TGCGACAGGC CCTTGGGTCA ATAAACTTAT TGGATGCGTC
ACTCCTCCAA TGGCAAAAGA GGAGGTTGAG TTGATACAGG GCAGTCACCT TTTACTCGAT
ATTCCCTCAC CCGATGGGAT CTTGTATCTA GAATCCTGCT TCGATGAAAG AGTCGTATTT
GTTATGCCTT GGGAGGGGAA AACCTTGCTG GGAACCACGG AAACGACCCT AGCAAGCTTA
GATGAAAAAC CTCAACCTAC CAGAGAGGAG AGCTATTACT TGTTGGGGAT CTACCGCCAT
TATTTCCCTG AATCTGGCGA TATAGAGACG TTAGAGGCCA AGATTTATGA CACTTTTTGT
GGAGTAAGAG TGCTACCTAA GCAAGCAGGG CAAGCGTTTG AACGCTCTCG AGAGCTTTGG
TTACAATCTC GTGAATCACA CCCTAGGTTT CTCACTCTTT ATGGCGGCAA GCTCACAACA
TTTCGCTCAA CAGCCAAAGA GGTGACCCAT TGGCTTCATG AGCGCTTAGG TGAAAGAGTT
GAAATTGCAG ATATCGACAG GCTGCCTCTT TATTAG
 
Protein sequence
MDRFDLVIIG GGINGAGIAQ CASAAGFSVL LLEKGEIAEQ TSANSSKLIH GGLRYLESGQ 
LSLVRKSLSE RRALLKLAPN LVKPIPFYIP VYENSQRSQW AIRAGLSAYA LLSELDPLGQ
FKSLPAVQWP NIKGLKLQGL EAVFQYWDAQ TDDKALTKSV VRSAVELGAK VLQGAECDAL
VHRPDHCEVS YLYQDERCKV TASCVVNATG PWVNKLIGCV TPPMAKEEVE LIQGSHLLLD
IPSPDGILYL ESCFDERVVF VMPWEGKTLL GTTETTLASL DEKPQPTREE SYYLLGIYRH
YFPESGDIET LEAKIYDTFC GVRVLPKQAG QAFERSRELW LQSRESHPRF LTLYGGKLTT
FRSTAKEVTH WLHERLGERV EIADIDRLPL Y