| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0891 |
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| Symbol | |
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| ID | 6115125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1187824 |
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| End bp | 1189038 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641632375 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001759280 |
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| Protein GI | 170725254 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAAAA TAATACGAAG ATTAACCCCT CTCTTCATAC TTTTTTTCTT TGGCATGGCC
GCTTGGCTAC TTATTAATAC CAAAGAAAGC CCTGAGCAGA AAGAGGAAGA AAAACCAGCC
CAAATAGTGG ATGTGGTAAA AGTTGAACAG CAAACCGTTT CCCTGAACTT ACCTTCATAT
GGTGTTGTCA CCCCTAAGAA TAAAACTCAG CTAGTCACTG AGGTAAAAGG ACGTCTACTT
AGTATCTCCC CCAACTTTGT TGCTGGTGGA GTGGTTAAAA AAGGGGAGCA GCTCGCCATG
ATTGAGCCAT CGGATTATGA AGCCGATCTG AGTCAAGCTC AGGCTAGCCT TGCCCAAGCA
CAGGCCGCAT TAGAGGAGGA GATTGCTCGT GGTGAGGTCG CTAAGAACGA CTGGAAAGGC
TACGATGGTG GGCTTCCGCC AGAGTTAGGC CTCAGGCTGC CTCAACTAAA AAAAGAGCAA
GCCAATGTTA AGTTTGCTCA AGCTGCTATG GCCCGCGCCG AGCGAAACCT AGAGAGAACG
ATCATCCGCG CCCCCTTTGA AGGGATCATC AAAACAAGAA TGGTCGATCT AGGCCAATAT
GTCACCCTAG GAACCAATCT GGGTGAGCTT TATGATACCC GCATTGCTGA GATCCGCCTG
CCACTTGCCA ACAATGATCT TGCTTACCTA GAGTCTGTTG ATAAACCTGA TACACAAGTC
ACGCTCAGTG CATCACTTGT AGGCAAAGAA GTAAGCTGGA CAGGAGATAT CGTCCGCAGT
GAAGGCGTTA TTGATGCCGA TAACCGCATG GTATATCTGG TCGCCGAGAT AAAAGATCCC
TACCTAAGAG AATCAAAACA TCAAGGGCAG TTACCACTTA AATATGGCAG TTTTGTTACC
GCTATCATTA AAGGGCGTAC CGTTGAGGGC ATTGTAAAAC TGCCTCGTCA TATCGTTCGC
AATAATCAAG TAGCCGTAGT TTCTAGTGAT AATATAGTTG AGGTTCGCGA CGTTAATATT
GTTCGCACCG ATGTCGACAG TGTCTACATT AAAGACAGCC TTTTAGATGG CGAACGTATC
TCCTTAACTA AACTCTCCAG CATGCGCTCT GGCCAATCAG TCAAAATCTT AGGTGAAGCG
GATAATAGTG GCAGCAAGTC GCCACAAACA GATGAAGATA AAGAGCAACA TTTAGCAGCA
AAAGGTGAGC AATAA
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| Protein sequence | MIKIIRRLTP LFILFFFGMA AWLLINTKES PEQKEEEKPA QIVDVVKVEQ QTVSLNLPSY
GVVTPKNKTQ LVTEVKGRLL SISPNFVAGG VVKKGEQLAM IEPSDYEADL SQAQASLAQA
QAALEEEIAR GEVAKNDWKG YDGGLPPELG LRLPQLKKEQ ANVKFAQAAM ARAERNLERT
IIRAPFEGII KTRMVDLGQY VTLGTNLGEL YDTRIAEIRL PLANNDLAYL ESVDKPDTQV
TLSASLVGKE VSWTGDIVRS EGVIDADNRM VYLVAEIKDP YLRESKHQGQ LPLKYGSFVT
AIIKGRTVEG IVKLPRHIVR NNQVAVVSSD NIVEVRDVNI VRTDVDSVYI KDSLLDGERI
SLTKLSSMRS GQSVKILGEA DNSGSKSPQT DEDKEQHLAA KGEQ
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