| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0880 |
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| Symbol | |
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| ID | 6115114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1174714 |
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| End bp | 1175454 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641632364 |
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| Product | hypothetical protein |
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| Protein accession | YP_001759269 |
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| Protein GI | 170725243 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3137] Putative salt-induced outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGAAAC TGCTTATTGC ATCAGCTATT TTAATGGCGG CACCTTTTGC TGCTCAAGCC
GGTGCTGATT TTGTTGAAGG CGATAAGACC TTTGGTGGTG ACGCTGAGCT GGGTGCCACC
ATCACCACTG GTAATACCGA GACGACCTCA TTAAAGGGTC GTTTGGATAT GAAGCATGAG
TTAGGTAACT GGGAAAACCA ATATCTATTG GAAGCCCTTT ATAAAGAGGA TACAGGCGAA
GTAACGGGTA AGCGTTACTA TGGTCTATTC CAAGCTGATT ATAAGTTTGA TGAGGTGAGC
TACCTGTTTA TCAATGCTAA CCACGAGGTT GATCCTTTTA CAGGTTTTGA TTCTAAATCT
ACTATCTCTT CAGGTTATGG CCATAAATTT ATCGATACAG GTAAAACCCT GTTTAATGTT
GAAGTGGGTC CTGGTTACCA GTATAAGCGC TTAGACAATG AGAGCGCTCT AGAAGCGGGT
TATGATACGG AAGACAGCTG GGTTGCACAC GGCGTGGTGA ACTTTGAAAC TGAAATTACA
GATAGCTCTA CGTTTAAGCA GATGTTTGTT GCCGACTATG GCGAGAGCCT AGAGGGACGT
TCAGAGACAT CAATTACAGC AAGTATTATT GGTGCTCTTG CGATGAAGTT TGCCGTTGTG
GTTCGTTACA ACAGTGAACC ATTGGACAAT AAAGAAAGCA CTGATACTGA AACCAATATG
ACGTTACTGT ACGCGTTTTA A
|
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| Protein sequence | MKKLLIASAI LMAAPFAAQA GADFVEGDKT FGGDAELGAT ITTGNTETTS LKGRLDMKHE
LGNWENQYLL EALYKEDTGE VTGKRYYGLF QADYKFDEVS YLFINANHEV DPFTGFDSKS
TISSGYGHKF IDTGKTLFNV EVGPGYQYKR LDNESALEAG YDTEDSWVAH GVVNFETEIT
DSSTFKQMFV ADYGESLEGR SETSITASII GALAMKFAVV VRYNSEPLDN KESTDTETNM
TLLYAF
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