| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0868 |
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| Symbol | |
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| ID | 6115102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1159990 |
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| End bp | 1160949 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641632352 |
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| Product | putative diguanylate cyclase |
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| Protein accession | YP_001759257 |
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| Protein GI | 170725231 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAGCCC AAAGTCAACA CCATCTTCTT TGGCTAAGAG AGCAAGACCA CCCTGCTATT
AGCTGGCCTA AATGGCAGCA ACAACTGTCT CTACTTGGCG AATGTTATCA AGCAGAAACT
TGCCTCATTG TGCAGTTCAT CAATAACTCA TTTCAGATTG TTTGTGCCCG TAAAGGTAAG
AAGTATCAGT TGATTGGTGG CACCCATTTT GAAGATGCGG GTTTACAGTC CATCATAGAG
GAGCATAACG GTTACACGGC AACAATCTCA GACGGCAGAG ATCTATCCTC CTCTTTGAAT
CAATTTAAAC ACCTGCTGAC CCAACCTATT TTTTGGCCTG ACGGGGAGCT GTTTGGCTCT
ATTCTAATCT GCGACCCAGA TCTGAATAAA CAGACGGGAC CACTATCCTC CCTAATTGAA
AACAGTAAAT CTTTTATTCA AGCTGAGCTA AAGCACCTAT TTTTAATGCA GCAAATTAAG
ATGCTCTCGG TACAAGATGA TCAAACCTGC ATGCTAAACC CCTATGGGTT TAGCTTAATG
GCTCCTAGGC AGTTAAGCCT AAGTCGTCGC TTTGGCTCCC ATGCAGGAAT TATTCTAATT
GAAGAAAATA TTGAGGAGAA CATTGAGGAG AGTAATAGCT CAGCCTTAAC CTGCGATTCT
CAAGCTCAAA AACGACGACT TCTAGCCCGC ATTATCCATG ACAATATGAG AGATGCTGAT
GTTTCTGCAA GGATCAGCCA TAACCAATTT ATTATTCTCT GTTTTATCGA CCATAAAGCC
AATTTAGACT CATTAGTTTC AAGATTGAAA AAGCAGATAG CAAAAGAAGC CCCAGGACTG
ACCATCAATA CAGGTCAAAG CTTCTTCACC CCAGATACTC AAATAAGCCT CGAGCCGATG
AAAAAACAAG CAAATGACAA TCTAAATCTA AATAAGCTGG GAAGCGCGAA CAACTTTTAA
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| Protein sequence | MLAQSQHHLL WLREQDHPAI SWPKWQQQLS LLGECYQAET CLIVQFINNS FQIVCARKGK
KYQLIGGTHF EDAGLQSIIE EHNGYTATIS DGRDLSSSLN QFKHLLTQPI FWPDGELFGS
ILICDPDLNK QTGPLSSLIE NSKSFIQAEL KHLFLMQQIK MLSVQDDQTC MLNPYGFSLM
APRQLSLSRR FGSHAGIILI EENIEENIEE SNSSALTCDS QAQKRRLLAR IIHDNMRDAD
VSARISHNQF IILCFIDHKA NLDSLVSRLK KQIAKEAPGL TINTGQSFFT PDTQISLEPM
KKQANDNLNL NKLGSANNF
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