| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0840 |
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| Symbol | |
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| ID | 6115074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1128153 |
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| End bp | 1129019 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641632325 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001759230 |
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| Protein GI | 170725204 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGATT GGGATAACTA CCGACTCATA CTCGCTTTGC ATCGTTCTGG CACCCTACGT
GGTGCAGCTG AGCGCTTGAA TGTTAATCAC TCAACCATCT CCAGACGCTT GGTGTTGATG
AATAAGGATG CTGGTGGGGA GCTGTTTGAG AAGACGACAT TGGGCTACCG TTCAACTCCT
TTAGGGGATG AGCTTATTAG CGCGGCGCTT CAAATCGAAG AGATCACCAT CTCAAGCGAG
AGACAAAAAC GTGCCAGTGC AGAGGATATG TCTGGTGAGA TTAACCTATC TGTTCCTCCG
CCAATATTCC AATACCTGCT ACTCGATGAT TTTAAGCGAT TTCAACAGCT CTACCCAAAA
ATACGCTTGA ATATTAACGC CTCTTTTGAG CTCTTAAGTT TAGATAACTC CGATGCTGAT
ATTGTAATTC GCGGCACAGA TAATCCCCCT CAACACTTGG TTGGTCGCTG TATTGGTACC
ATTAGGTTGG GCTATTACGC CCAAAAAAAC TATTTAACCA ATACTCTTGA AAATGAACGT
CGCTGGATTG GTCGAGATGC GCAGGAGGAG TCGCCCGAGT GGATAAAAGA CTCTCCTTTT
CCAACTCTCA AGATAGGTAT ACGTTCAGAT GACATTATGA CTCGCCACCT GATGGCTGTT
GCTGGGTATG GCCTTACCCG TGGAGCCTGC TTTATGGCTG AACAGGAGCA AGAGTTAGTG
CGGCTTTCAG AGCAATACAC GGATTACTCT GCTCTTTGGG TGTTAACCCA TCCAGATCTG
AAAGAGACCC CGCGGATAAG GGTATTAGCT AAGTTCCTTA TCGATTGTCT ACTTGAGAAA
AAAGGGATGA TTGAGGGAAA CGTGTAA
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| Protein sequence | MKDWDNYRLI LALHRSGTLR GAAERLNVNH STISRRLVLM NKDAGGELFE KTTLGYRSTP
LGDELISAAL QIEEITISSE RQKRASAEDM SGEINLSVPP PIFQYLLLDD FKRFQQLYPK
IRLNINASFE LLSLDNSDAD IVIRGTDNPP QHLVGRCIGT IRLGYYAQKN YLTNTLENER
RWIGRDAQEE SPEWIKDSPF PTLKIGIRSD DIMTRHLMAV AGYGLTRGAC FMAEQEQELV
RLSEQYTDYS ALWVLTHPDL KETPRIRVLA KFLIDCLLEK KGMIEGNV
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