| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0827 |
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| Symbol | |
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| ID | 6115061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1113234 |
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| End bp | 1115012 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641632312 |
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| Product | glutamate decarboxylase |
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| Protein accession | YP_001759217 |
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| Protein GI | 170725191 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTATTG ATAAGAAGAC AAAGTTAACA ATTCCATTTG GTATAAATGG TGAGCCATGG
ATCAGCCAGA TCCCTGAGAT GGCATTCTCA GTTGAGGGGG AGCTGATGAT CACCCCACCT
TCAGCCGACC CTGCGGTGAT ATACCAGATA CAAAATAGGG AGTTTATGGG ACAGCAGGAG
CAGATTAAAG AGTGTTATGT TCAGCTTCCA CCTCGTGGTC AACAGGAAAA TCAAGTATCC
AATCAACAGG TGTTACAGGG CTATCTTCAG CAGCAACAAG ATAACTTTTT GGGTTATCAG
CTAGTGGTGA ATACTGAATA TAGCGACCTG TTTCCTGCCA TGAATACCAT GATTAATAAT
CTAGGCGACC CCTTTACTAA CGGTTATTAC ACCGTCAATA GCAAGCCTGC TGAACGTGCG
GTCTTGGACT TTTATGCTTC TGTATGGCGC GCTAACTGGC CATCACAAAA TACAGGAGAC
CCAGATAGTT ACTGGGGTTA TGTACTGAGT ATGGGGAGCA CAGAGGGCAA CCTTTACGCT
ATGTTAAATG CTCGTGATTA CCTGTCAGGA AGACGACTGG TTGTTGATCA AAATAATCAC
CATTTAGTGA AACCAAAACG CAGAAGCAGT AATAAAAACT ACTATAAACC CATCGCTTTT
TTCTCAGAAG ATACCCATTA CTCATTAACT AAGGCTATTC ATGCCATGAG TATTCCCTCG
TTTTATGAGA TAGGGAGTGA ATTTTACCCC TATGAATGCC CGTTAGGCGG GGACTGGCCT
GAGCAGGTTC CCTCTGAACA ACCTAGCATT GAAGAAGCAA ATCTAGGGAA AATAGGCTCT
GGCGCTATTG ATATCGAGAA GCTTCGTCTG TTGGTCGAAT TTTTTGCTAA AAAAGGCCAC
CCTATTTTAA TTGTCTTAAA CTACGGAACG ACGTTTAAGG GGGCTTATGA TGATATACCT
GGGGTGTATC GAGCCTTAAA GGATATCTTC ATAAAGTATG ATCTGATTAA CCGTGAAGTC
TGTTTTGGTG ATAATCATGA TGTTGATGTA AGGCAGGGTT ACTGGTTTCA TATCGATGGA
GCATTGGGTG CATCATTTAT GCCTTTTATA AATATGGCGA TGAAAACTGG TGAGTTGAAT
AGAGAAAATT GCAGTGAGTG TTCACTTAAA TTTCCTGAAT TTGATTTTAG CTTGCCTTAT
ATCAACTCGA TTGTGACCAG TGGCCATAAG TTTTTAGGTG CACCAACGCC TTGTGGCATC
TACATGAGTA AACATAAGTA TTTAGCGACA ACCAATCATC CAAGTTATAT CGGCGCTGTT
GATTCTACTC TAGCAGGTTC AAGAAATGGT TTAGCCTCTT TGACACTATG GTCTTTATTG
GGAAAAACCG GCTATAAGGA GCTGCAAGCT AGGGCGATTA AGTCTCTTTC GATGGCATTA
TCACTCCACG CCAGATTAAA AACTTTGGGG GATATGATCA TGGAGCGTGA TGGGATTGAT
ATATGGCTAC ATAGATCGGA TTTCTCTTTG AGTATTTTAA TGCGTAAAAC CAATAAAGAT
ATCACGTTTA AATACTCATT ATGTGAGGCT AAAGAGTTGG TGAGTAGAGA GGGGAGAAGT
TATAGCAGAC AGTACGTTCA TCTCTATTGT TTATGGGATA GAAAAGAGTC TGCACTGGAT
AGCCTCATTG AAGATCTGTC ACAGCCCGGT GCATTTGATA TGAACTGTGA AACTGAGCTG
GATAGCTCGT CGGAGCTATT ATCTGCATCT GTTAATTGA
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| Protein sequence | MFIDKKTKLT IPFGINGEPW ISQIPEMAFS VEGELMITPP SADPAVIYQI QNREFMGQQE
QIKECYVQLP PRGQQENQVS NQQVLQGYLQ QQQDNFLGYQ LVVNTEYSDL FPAMNTMINN
LGDPFTNGYY TVNSKPAERA VLDFYASVWR ANWPSQNTGD PDSYWGYVLS MGSTEGNLYA
MLNARDYLSG RRLVVDQNNH HLVKPKRRSS NKNYYKPIAF FSEDTHYSLT KAIHAMSIPS
FYEIGSEFYP YECPLGGDWP EQVPSEQPSI EEANLGKIGS GAIDIEKLRL LVEFFAKKGH
PILIVLNYGT TFKGAYDDIP GVYRALKDIF IKYDLINREV CFGDNHDVDV RQGYWFHIDG
ALGASFMPFI NMAMKTGELN RENCSECSLK FPEFDFSLPY INSIVTSGHK FLGAPTPCGI
YMSKHKYLAT TNHPSYIGAV DSTLAGSRNG LASLTLWSLL GKTGYKELQA RAIKSLSMAL
SLHARLKTLG DMIMERDGID IWLHRSDFSL SILMRKTNKD ITFKYSLCEA KELVSREGRS
YSRQYVHLYC LWDRKESALD SLIEDLSQPG AFDMNCETEL DSSSELLSAS VN
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