Gene Swoo_0822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0822 
Symbol 
ID6115056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1108636 
End bp1109136 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content48% 
IMG OID641632307 
Productmethionine sulfoxide reductase A 
Protein accessionYP_001759212 
Protein GI170725186 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTAG AAAGAGCCAT CTTAGCTGGT GGGTGCTTTT GGGGAATGCA GGATCTTATT 
CGTAAGCGTG AAGGTGTTAT TGCAACGCGA GTGGGCTATA CCGGCGGTGA TGTGGTCGAT
GCCACTTATC GAAATCATGG TACCCACGCT GAAGGGATAG AGATCTTATT CGATAACACT
CGGACTAGTT TCAATGAGAT CCTCGCTTTT TTCTTTCAAA TTCATGATCC GTCTACGCCT
AATAGGCAGG GTAATGATAG AGGCTCATCT TATCGCTCAG CGATCTTTTA TGATTCAAAT
GAGCAGAAAG AGCAGGCACA GAAGATGATT GTTCGTATGG ATGCATCTGG GATCTGGCCT
GGACCTGTTG TGACTGAATT GGTTCCTGCG GGTGATTTTT GGGAGGCGGA GCCTGAGCAT
CAAGATTATC TAGAGCTGAG GCCGAACGGG TATACCTGTC ACTTCCCTAG GCCAGACTGG
GTTTTGCCAA GTGAAGAGTG A
 
Protein sequence
MAVERAILAG GCFWGMQDLI RKREGVIATR VGYTGGDVVD ATYRNHGTHA EGIEILFDNT 
RTSFNEILAF FFQIHDPSTP NRQGNDRGSS YRSAIFYDSN EQKEQAQKMI VRMDASGIWP
GPVVTELVPA GDFWEAEPEH QDYLELRPNG YTCHFPRPDW VLPSEE