| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0821 |
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| Symbol | |
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| ID | 6115055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1106609 |
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| End bp | 1108234 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641632306 |
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| Product | EAL domain-containing protein |
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| Protein accession | YP_001759211 |
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| Protein GI | 170725185 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4943] Predicted signal transduction protein containing sensor and EAL domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTAACTA AGCAAACCAC ACATCAAACA TCTTGGTGCA AAGCACCTTG GTTTCATACC
CTGCTTATCT TTATTATTCC GTTACTCTTG GCGGTATTAA TTCATCCGCA ATTAGCACAA
TATGAGCTTG AATCCAAACT GCAAGAAGAT CTAGATTTTC TTGCACAATC TCTGATTAAG
CAGACCACTA TCTTGGCAAC TGACGAGGGG AAAGAGAGCT TCTCTCAGCT ATCATGGAGC
TGTAATGAAG CCGATATTGC CCTATTAAAA AGCGCTGAGT TTAGCCCTGA GATGGTGCGC
CTAGTTCAAA TGGAGCTAGC AAGTGGTGAG AAGTGCTCAA ACCTCTCTTC GCCTTACTAC
CATATGGCTC AAAATACCAA GAAGTACCCA CAATCTAACA TCGAGGTTAG TATCTCTGCG
GATCAAAACC CCTTTCTGCG AGATTTTATT TTTGAGTTCC CAGTGGGGAA CCACAGTTTA
ATTGCCATCA CTAATAGAAC GGTATTCAAC AGCTTTCTCA CCGATCTCTG CCCTAACTGC
TATCAGGTCG ATATCCAATA CCATGGATTG CCTGTCGTTT CACGGGGTAA GCAAACCGTG
TCAAACACTA AAAATAGCAG GAGTGTTAGT CACTATATTC CCGCTCTGGA TCTGACTCAA
ACATTGAACA GTGGCGATGC CATGTATCAG CTCTTCTATG ACAAGATCTG GCTTAACTTG
GTCTGCCTAA GCTTAGTGCT GTCATCTCTA GGTGCTATCT TTTACTGGCA ATGGCAACAG
CGCCGTGTGT CTTTGGAAAG TATGCTAGTC AACGGGTTAA AAAACAGCGA GTTTACCCCT
TTCTATCAGC CAATCATTGA CACCCGTAGC CACCAAATTG TGGGACAGGA GATGCTGGTT
CGCTGGCGCA GAAGTGATGG TAACTTGGTG TTGCCGAATC AATTTATCCC CTACGCAGAG
GATTCGGGGC TGATTATTCC CATTACAGAA TCAACCCTAG CACAGGTCAA GCGAGACATT
CCCAAACTAC TTGGCTGGAT CAGTGTCAAT ATTGTTGCCG AGCACCTTGA AAAGGGGCTA
CTGAGTCAAT GGCTTGATAG AAATGAAAGC TGTGATACTC AAAGGTTATG TTTTGAATTA
ACAGAGCGTA AACCGATAGA GAATTTTGAC AAAGCCATCA TTGAGATAGA GCGGCTTGTT
TTTCAATGCC AAGGTTTTAA GCTTGATGAT TTCGGGACGG GATTTGGCGG GTTCAGTTAC
CTGCAAAAAC TAGGATTTAA CTGTATTAAG ATAGATAAGA TGTTTATCGA TACCATTGGT
ACTGACGATT TAAAAGCTGG TGTATTGAAA TCTATTATTG CCTTTGGCCA TGAGTCAAAA
ATGGAGATGA TAGCAGAGGG GGTAGAAACT CAAATTCAAG CTGACTATCT CAGTGAACGT
GGTGTATATC TGCATCAAGG TTACCTCTAT TCTCAGCCTG TTGGGTTAGA TGAGCTACTG
CACTTTTATG ACAGATACCT TAATAAAGAG AAAGCTCATG AAGCATCTCA TAAAGCCAGC
TCTAAATTAA CAGGGAGATT TCCACTAAAG AAGATAAGGT TCCCGAAACC TCCTAATCTA
CTGTAA
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| Protein sequence | MLTKQTTHQT SWCKAPWFHT LLIFIIPLLL AVLIHPQLAQ YELESKLQED LDFLAQSLIK
QTTILATDEG KESFSQLSWS CNEADIALLK SAEFSPEMVR LVQMELASGE KCSNLSSPYY
HMAQNTKKYP QSNIEVSISA DQNPFLRDFI FEFPVGNHSL IAITNRTVFN SFLTDLCPNC
YQVDIQYHGL PVVSRGKQTV SNTKNSRSVS HYIPALDLTQ TLNSGDAMYQ LFYDKIWLNL
VCLSLVLSSL GAIFYWQWQQ RRVSLESMLV NGLKNSEFTP FYQPIIDTRS HQIVGQEMLV
RWRRSDGNLV LPNQFIPYAE DSGLIIPITE STLAQVKRDI PKLLGWISVN IVAEHLEKGL
LSQWLDRNES CDTQRLCFEL TERKPIENFD KAIIEIERLV FQCQGFKLDD FGTGFGGFSY
LQKLGFNCIK IDKMFIDTIG TDDLKAGVLK SIIAFGHESK MEMIAEGVET QIQADYLSER
GVYLHQGYLY SQPVGLDELL HFYDRYLNKE KAHEASHKAS SKLTGRFPLK KIRFPKPPNL
L
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