| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0809 |
|---|
| Symbol | |
|---|
| ID | 6115043 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 1093127 |
|---|
| End bp | 1093840 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641632294 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001759199 |
|---|
| Protein GI | 170725173 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGGA GACTCATTTT ATCAATACTA TTAATACTTT CTACATGGGA TAGCCTTGCT
AAAGAGTATC ACTTCGTCTC AATAGAGAAC TTAATAGAGC AGGAGGTGGG GCGAAAAGTA
TTACCACACT TTTACAAAAA ACTGGGTCAT AGCATCACCA TCACTCCTCT TCCAGGAAAG
AGAGCGTCAA CAACCGTCTC TGTAGGAGAA AAGGATGGCG AGATTATGCG TATCTTCACT
TACGGCATGG AACATCCAAA TACTTTACGT ATTCCAACCC CATATTATTC CCTACAAACC
ATGGCCTTTT ATAAAAAAAG CAGTGGCGTT GTAATCAACC GTAAGGAAGA TCTTCAGCAC
TATAAGCTTG TCAAAGTCCG CGGAGTCAAA CACACCAATA ATATCACCCA AGGGATGCCA
TTCGTTCACG ATGTTGACTC CACAGTCGCC ATGATGGATC TACTCGAGTT AGGTCGAGTC
CAAGTCGCAC TCACGAACAC AATAGATGGC CTATTGGCGA TTAAGGCCCG AGGTTATACC
GATATCATAA GCTTAAGCGA ACCGCTAGAT GAGCTCAGCC TCTATCACTA TGTTCATCAA
GAACACTCAC AACTCGTTGA TGAAGTGGAT AGTGTAATCA AACAGATGAA GCTAAATGGT
GAGCTTGAAA AAATAATCAA GCAGGCTGAA AAAGAGGTGT TTAGCGCGAA TTAA
|
|---|
| Protein sequence | MKGRLILSIL LILSTWDSLA KEYHFVSIEN LIEQEVGRKV LPHFYKKLGH SITITPLPGK
RASTTVSVGE KDGEIMRIFT YGMEHPNTLR IPTPYYSLQT MAFYKKSSGV VINRKEDLQH
YKLVKVRGVK HTNNITQGMP FVHDVDSTVA MMDLLELGRV QVALTNTIDG LLAIKARGYT
DIISLSEPLD ELSLYHYVHQ EHSQLVDEVD SVIKQMKLNG ELEKIIKQAE KEVFSAN
|
|---|
| |