Gene Swoo_0795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0795 
Symbol 
ID6115029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1076862 
End bp1077926 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content46% 
IMG OID641632280 
Productglycosyl transferase group 1 
Protein accessionYP_001759185 
Protein GI170725159 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGGCCCA GAGTGCTCCA CCTGATCGAT GACTGTAAAC TTGGAGGAGT CAATTTGGCT 
CTAAAGAGTT TGTGCGAGTC AAGATTGGCG GAGGATTTTG AGTTTTCCAT TACTCATATT
GATCTTGCAA CCCACCGCAT TAAGCGATTT GAGGCCGATA TTATTGTGCT TCATACCTCA
TCTTCATGGA GAAAACTGCC AGGGTTTATC TCACTTTGCT TCAAAAACCG AGGCACACCT
TTACTGCTTC AAGAGCACCA TTATTGCGAA GGGTTTGTCG CCCATGAGTT GCCTAATAAG
TGGCGTTTCT TTCTAATGCT TAAGCTGAGT TACACTCTGA TGGACAGAGT GTTGGCCGTC
TCTGTCGCCC AGGCTAAATG GTTACTTGAT AATCGCTTGG TTAACGCAGA TAAGCTGGTG
GTACTCAAGC AGGCAAGACC CGTTAATACC TTACTCTCTT TGCCTGAAAA GGCGCTCTCG
TTTCCTATTC AACTAGCAGC CTATGGTCGG TTTCATAAGC AGAAAGGGTT TGATCTCTTG
CTTAAGGCGA TGGAGAAGCT CCCCTCTGAA AAAGTGGAGT TAAGGCTCGC TGGAAGCGGT
GAGATGTCAC CACTTTTAGA TTCGATGGCC GCGACTCTGG AAAACGTTAC CTTGATTGGA
GAGATTGAAG ATGTCCCCCT ATTTTTATCC TCCTGTGATG CAGTGGTTAT CCCATCTCGT
TGGGAGCCTT TTGGCTTGAT ATGCCAGGAG TCGATTGCAG CGGGAAAAAT GATTGTGACA
ACCTCAGTAG ATGGCTTATC GGAGCAGTTG GCAGAACTGT TAGCGACAAG AGGTGACGAG
GAGCTATCTG TGCTGCTGAC GGAGCAGAGC GTTAATGGTC TGGTTGATGC GCTGGAGTGC
TTAATTTCTC AAGCTGAGCA TAAGTTAGCG GTCGAGAAGG TGAGGTGTTT ATCAAACTTA
ACCTATGAAG ATAGATGTAT AGCAGCAAAG TGTTGGCCAA CACTCGTTGA AACTTGGAGA
GAGCTACTTT TCTCTGAACA GCATAGAGCA AAAAGGCTCC AGTAG
 
Protein sequence
MRPRVLHLID DCKLGGVNLA LKSLCESRLA EDFEFSITHI DLATHRIKRF EADIIVLHTS 
SSWRKLPGFI SLCFKNRGTP LLLQEHHYCE GFVAHELPNK WRFFLMLKLS YTLMDRVLAV
SVAQAKWLLD NRLVNADKLV VLKQARPVNT LLSLPEKALS FPIQLAAYGR FHKQKGFDLL
LKAMEKLPSE KVELRLAGSG EMSPLLDSMA ATLENVTLIG EIEDVPLFLS SCDAVVIPSR
WEPFGLICQE SIAAGKMIVT TSVDGLSEQL AELLATRGDE ELSVLLTEQS VNGLVDALEC
LISQAEHKLA VEKVRCLSNL TYEDRCIAAK CWPTLVETWR ELLFSEQHRA KRLQ