Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0771 |
Symbol | |
ID | 6115005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1050337 |
End bp | 1050891 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641632256 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001759161 |
Protein GI | 170725135 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTAAGC GTTCGAAAGC GGAAACAGAG CAAACGATCA ATCTAATTAT GGATGAGGCG CTTAAACAGC TTCTGTCTTT AGGCTACGAC TCCATGTCCT ACACTACCTT GTCGACAGCA ACCGGAATAA GTCGCACTGG GATAAGTCAT CACTTCCCTC ATAAGGCTAA TTTCCTGATA CGTTTAGATC CGCAAATTAG CAGACTTTTT CTGGAGGAGT TGGATTTTAG CAACTTGGGT ACACTCGAAG AGTCATGGAT TGAGTCGATA AAACACCCCA CAGGACGCAT GGTACTTAAA CTGTTTTTCA GTCTGTGTGG CGATCACTGT GAAGATGTGA TTCAGTTTAG GGCGATCCAT TTAGCTAGAG AGAGGGCTTA TGAGATGTTT GGTCTAGAGG GGGAGAAGTT AGTTACCGGA TTAATCGGGA GAAGTGCCGT GATGCTTATG TCGCAATCGA CACACATTAA AGTGCCTCAA TTACAGGCCA ATGAGTTGAA AACGCGAAAC CGTGGGAACA CAGAAAGTCG TTTAGCGATT CTCTCTGAGT ATTAA
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Protein sequence | MAKRSKAETE QTINLIMDEA LKQLLSLGYD SMSYTTLSTA TGISRTGISH HFPHKANFLI RLDPQISRLF LEELDFSNLG TLEESWIESI KHPTGRMVLK LFFSLCGDHC EDVIQFRAIH LARERAYEMF GLEGEKLVTG LIGRSAVMLM SQSTHIKVPQ LQANELKTRN RGNTESRLAI LSEY
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