Gene Swoo_0634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0634 
Symbol 
ID6114868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp878745 
End bp879230 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content45% 
IMG OID641632120 
ProductMarR family transcriptional regulator 
Protein accessionYP_001759025 
Protein GI170724999 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.353254 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCAA GTGAGCACGA TTCTAAAAGG GAGGATGAGG TGAGCTTAGA GATGGAGCAG 
TTTTTTCCTT TTCAGCTCAC CCAGTTACAG GCTCGCGTAA GTGACAGTAT TGCTGATATC
TACACAGGTC ATTTTGCGCT ATCCAAGCAT GAATGGCGTA TCGTGGCAGT ATTGGGTGCG
GGGCAGTCAC TGTCTGCCAA AGATATCGGC TTGATGATAA ATCTGGAGAA GATGCAAACC
AGCCGAGCTA TCGCTAAGAT GCTCGACAGA TCCCTTCTAA TGAAAGACAG CCACAAGCAT
GATAGGCGCT CCTCATTATT AAAGTTAAGC CCAGAGGGAA TTAAGATCCA TCAAGAGCTA
GCCCCAATGA TTTTAGCCAG AGAGCAAGCC CTTATGTCGA TACTGAGTAG CTATGAACAG
GTCAAGCTTA GTCAGATGTT CAAAAAGCTA ATGAGTAGAG CTGACGAGCT TTTACACAAT
GGATAA
 
Protein sequence
MSASEHDSKR EDEVSLEMEQ FFPFQLTQLQ ARVSDSIADI YTGHFALSKH EWRIVAVLGA 
GQSLSAKDIG LMINLEKMQT SRAIAKMLDR SLLMKDSHKH DRRSSLLKLS PEGIKIHQEL
APMILAREQA LMSILSSYEQ VKLSQMFKKL MSRADELLHN G