| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0609 |
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| Symbol | |
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| ID | 6114843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 855257 |
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| End bp | 856165 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641632095 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001759000 |
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| Protein GI | 170724974 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTTGT CGCTCTCCTT GATACTGCTT GGTATCGCCG CCCTGTTATG GGGGATGAGA
AGCCGAGATA TTAAGAGCCA GTTTTTGGTG AATAAAGTCG AGATGGCGGA GCCTGATGAG
ATCCGCTCTG CGGTAAAGTT GGACTCGCTG CAACACCAAG CTTGGCTAGT GAAGGTACAA
CTGCTGCTTC GACCTGCCAT TGTTGCACTG GGTGATAAAG CTTGGCTCAA GCTGACAGGT
TTTTTGCTGC TACTGAGCAG TGCTGGGGTC TATATCAATG GCTTTTTGCA GCTAGATAAT
GTCTGGTTAC CGATTGCTCT TCCAGTATTG GGCTTTTTCT GGGGTTGGAA CTATCTGATG
AGAAAGCGCA AAAACGCCTT TGATGAAACC TTCCCCGATG CCCTCAATAT TATGATGAGT
GCGGTCTCAT CTGGTGAAAG CATTATGCAG GCGATCGCCT ACGTGGGGCA GTCATTGGAT
AATCAAATTG GGTTGGAATT TAGGGATATG GGAGAGCGTC TTAAACTGGG CGAACCACCT
GAGCAGGTAT TCAAACGTGC CTGCAAACGC TTTCCCTACC CGACGTTTCT GTTTTTCATC
GTGACCATTC GCGCCAATAT GTCCAGAGGC GGCCAGCTAA AATCTGTGAT GGCTAGATTG
ATCCGTGTAT TGATGGACGC GAGAACGTTA GATAAGAAGA AAGCGGCTAT GACCTCTGAG
GCACGATTGT CGGCGAAGAT CGTCGCCTCA CTGCCCTTCT TCTTTATGAT TTTGCTGAGC
TATCTCAGCC CCCAGAACCT AGATTTTGTC CTAACGGATC CATCTGGGAG GTACATTTTG
TACTACGTTG TCGGAAGTGA AGCGCTGGGG ATGTTTATTA TCTGGTTACT TATCAGAGGT
GTTCGCTAG
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| Protein sequence | MILSLSLILL GIAALLWGMR SRDIKSQFLV NKVEMAEPDE IRSAVKLDSL QHQAWLVKVQ
LLLRPAIVAL GDKAWLKLTG FLLLLSSAGV YINGFLQLDN VWLPIALPVL GFFWGWNYLM
RKRKNAFDET FPDALNIMMS AVSSGESIMQ AIAYVGQSLD NQIGLEFRDM GERLKLGEPP
EQVFKRACKR FPYPTFLFFI VTIRANMSRG GQLKSVMARL IRVLMDARTL DKKKAAMTSE
ARLSAKIVAS LPFFFMILLS YLSPQNLDFV LTDPSGRYIL YYVVGSEALG MFIIWLLIRG
VR
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