| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0596 |
|---|
| Symbol | |
|---|
| ID | 6114830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 839602 |
|---|
| End bp | 841725 |
|---|
| Gene Length | 2124 bp |
|---|
| Protein Length | 707 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641632082 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001758987 |
|---|
| Protein GI | 170724961 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCCA ATGAGATAGC TGAACTCGAT ATTCAGAAAA GCATCCATAA ACACATCGAT
GATTTTAATA GCTTTCGTTT CAACGCTGGT GCGGGTGCAG GTAAAACCTA TGCACTGATA
GAAACGCTAA AATACGTCAC TATCAATAAA ATAGCAGCCA CCAAAAGCCC ACAAAAAGTG
GCTTGTATCA CCTATACCAA TGTTGCGGTG AATGAGATAA AGAGCCGACT AGGTAACTCA
GATGCGGTAA AAGTTTCAAC AATTCATGAA AGGATATGGA AGATAATCAA AAGGGCTCAG
CCTCAGCTTT TGATATGTCA TAAGGAGAAA ATAGAAGAGG TTATAGAGAA AAATAAACAA
GACCTGTTAG GCTCCCCCAA AGCCCAATTC TTTAATGACC TCGAACAGCC AGAACAACAA
GAGTTTTTGG AGTTTGCTAT ACAGACTAAA GATCTGTTCT ATCAATCTAA AAAACTAAAC
GCAGCTCCTT TCAGACACGC TTATAATACT GAGATTAATA AACCAGAATT TCTAGATAAT
TGCTTAAGAA ATGTAAGGAA CTTCAAATTT GTCGTTGGTC TATTATACAA AAAGCAAAGG
CTTAAAGTTT GCTTAGAAAG AATCGATACT GGAGAGATAA AGCGTGTTGA ATATGACAGC
AAGGTAAATT CTGACAGGCT TCACTACATG AAGTTCAGCC ATGATACCCT ACTAGAGTAT
GGGTTAAAGC TAGTTGAAAC TTACCCTACC CTTTGCCGCA TTATTATTGA TAGCTACCCT
TATTTCTTTA TTGATGAATA TCAGGATACA CATAGCAACG TAGTTAAATT TGTCAAAACT
ATTCATGACT ACGCAATAGA AAACAATAAA GACTGGGTGG TAGGCTATTT TGGTGATACT
GCGCAGAGCA TTTATGATGA TGGGGTTGGT CGAAAGATTG AAGGTCTTCA TGATGGCTTG
GTTAATGTCG ATAAGATATT TAATAGACGT TCACACCAGC AAATTATTGA TGTCGCCAAT
AACATTCGTG CTGATCAAAT AGTTCAAGTA CCTATCTTTG AGGAACGAAA TACTGGTTCA
GTACGCTTTT ACTACAATAA TTCAGAGGAC AAACTTACTA CAGCTCAACA ATTCCTAGTT
GAGTATAAAA ATGAACTTGT CACACACAAT GGAGAATCAG GAGATATATC TCCTGAAGAT
ACTAAAATTC ATTGCTTAGT ATTAACAAAC AAACTAATGG CAAACTTTAA TGGGTTTGGT
GATGTTTATG AAGTGTTTCA AAAATCAGCT ATCTATTATG ACAATCTAAA TACCCAAGTG
TTATCTCAAC AATTAGAAAA GCTACATCCA ACGGTTTTAG CCATTTTTCA CCTTATTAAG
CTTTACCAAG ATATACTACA AGGAAAGGTT TCGTACTATG ATGTTTTTGG AACGTCGAGT
AGAAATATGG CATTTTCCAA GGCAAGCTTG ATTATCCGTG AATTAGGAAA TACAGAAGTT
GCATCATTAA AAAATTGGGT CGACTTAATT ATTGATCGAC TTGATAATAG TAATGCTAAA
GAAGTTCTAG GTAAGGTACT GATTAATAGG GTTAATCATT TTGAGGGCGA TGTAATTTCT
GCTGATGTAT TTCGCTCATC ATTGTTAGAC AGCATTAATA TTCTAATGAA TGAGGATTCG
GAGGATGAAG ATAAGGCCAA AGAAAAAAAT GATAGCATTT TAGAGTTGCC AATCACATCC
TTAATGAACT GGGCAAACTT TATTTATGGT ATCGAAGCCG ATGATATTAG CTACCATACC
TATCATGGCA CTAAGGGTGA AGAGTACAAG AATGTCGCCA TCATCCTAGA GCATAGTTTT
GGTAAGATAA ATAAAGATAA ATTTAAAAAT TACTTTAATG TAATACAACA AAATGAGGAA
GAAAAAAAGC GCTTACTTTC TGACCGCGAA GTGGAAGAAA AACATATTAA TACCCAAAAT
TTACTCTATG TTGCCTCTTC GCGAGCGATA AAAAATCTTA GAGTACTGTA TTTGGATGAT
ATCTCGGAGA TCAAGGAAGG CATTGAGACT ATTTTTGGCG AGAGTAAACC TTGGCCAATA
GAAGATAATC ATATTCCTGA GTAA
|
|---|
| Protein sequence | MTSNEIAELD IQKSIHKHID DFNSFRFNAG AGAGKTYALI ETLKYVTINK IAATKSPQKV
ACITYTNVAV NEIKSRLGNS DAVKVSTIHE RIWKIIKRAQ PQLLICHKEK IEEVIEKNKQ
DLLGSPKAQF FNDLEQPEQQ EFLEFAIQTK DLFYQSKKLN AAPFRHAYNT EINKPEFLDN
CLRNVRNFKF VVGLLYKKQR LKVCLERIDT GEIKRVEYDS KVNSDRLHYM KFSHDTLLEY
GLKLVETYPT LCRIIIDSYP YFFIDEYQDT HSNVVKFVKT IHDYAIENNK DWVVGYFGDT
AQSIYDDGVG RKIEGLHDGL VNVDKIFNRR SHQQIIDVAN NIRADQIVQV PIFEERNTGS
VRFYYNNSED KLTTAQQFLV EYKNELVTHN GESGDISPED TKIHCLVLTN KLMANFNGFG
DVYEVFQKSA IYYDNLNTQV LSQQLEKLHP TVLAIFHLIK LYQDILQGKV SYYDVFGTSS
RNMAFSKASL IIRELGNTEV ASLKNWVDLI IDRLDNSNAK EVLGKVLINR VNHFEGDVIS
ADVFRSSLLD SINILMNEDS EDEDKAKEKN DSILELPITS LMNWANFIYG IEADDISYHT
YHGTKGEEYK NVAIILEHSF GKINKDKFKN YFNVIQQNEE EKKRLLSDRE VEEKHINTQN
LLYVASSRAI KNLRVLYLDD ISEIKEGIET IFGESKPWPI EDNHIPE
|
|---|
| |