Gene Swoo_0571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0571 
Symbol 
ID6114805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp804348 
End bp804923 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content43% 
IMG OID641632057 
ProductATP-dependent protease La 
Protein accessionYP_001758962 
Protein GI170724936 
COG category[R] General function prediction only 
COG ID[COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACAC AGGAGATGGC GTTAATCACG CGGGACGCTT TACTGTTGCC CGATGGTAGA 
CTTGAGCTGA GATTAGTAAG CCCCAATCAC TTAAAGATGA TTGCCGATGT ATATAAAGGT
AAATACCCCT TAGCATTTGG CATGTTAAAA GCTAATGGCA ACCCTCCCTG TTACTCCAGT
GTCACTCAAT GTGAGATCAT CGACTTTAAT CAGCTAGACG ATAACAGTTT GAGTATTGTA
CTTGAGGGTA AGCAGAGGGT AAAAATCTTG TCTGCGGCTC GACAGAGAAG TGGTGTGTGG
ATGGCAAGAA CACTACCATC TTGCAACTGG AGTGAGGAGC CGATTCAGGG AGAGTTTGAG
TTGATAAGCG CGGCATTAGA GCAGTTTTAT GAGGTCAATC CAGATCTATT TGAGCTCTAC
TCTAATGTGC ATTTAGAGGA TGCTTCTTGG GTCAGCCAAC GTTGGCTTGA GGTGCTGCCA
CTTTACAACA AAGATAAGTT GAAGCTAATG AATCAACCTG ATTGTCATCA GACCATGGAG
TTTGTTTTAG AGTTAATCAA ATCACATGCA GATTAA
 
Protein sequence
MRTQEMALIT RDALLLPDGR LELRLVSPNH LKMIADVYKG KYPLAFGMLK ANGNPPCYSS 
VTQCEIIDFN QLDDNSLSIV LEGKQRVKIL SAARQRSGVW MARTLPSCNW SEEPIQGEFE
LISAALEQFY EVNPDLFELY SNVHLEDASW VSQRWLEVLP LYNKDKLKLM NQPDCHQTME
FVLELIKSHA D