| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0566 |
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| Symbol | |
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| ID | 6114800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 797292 |
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| End bp | 799607 |
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| Gene Length | 2316 bp |
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| Protein Length | 771 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641632052 |
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| Product | aminotransferase class V |
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| Protein accession | YP_001758957 |
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| Protein GI | 170724931 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases
[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGA CAACAAACTT AAGTCAGATC TACCTCGATG CGAATGCGAC CACTCCGGTT
CTCCCTCAAG CCGCACAAGC TGCAATGGAT GCCATGCAAG ATCTCTTCGG CAATCCCAGC
AGTAGTCACA TAACTGGGCT CAAAGCGAAG AACTTAATGG AGCAGACCCG TCAGCGTGCC
AAAACACTGT TAGGCACAGG AGAGGGCAAG CTTATCTTTA CCAGTGGCGC TACTGAGGGG
ATCCAAACCG GAATATTGTC TGGTCTGATA AAAGCCAAGA CTCAGATTAA AAAAGGGAAA
AAATATAGCA TTCTATATGG CTCAACTGAG CATAAAGCCG TTCCTAACTC CTTGGCTCAC
TGGAATGAGA TCTTAGGGAT CAACGCCGAA ATTAAAGCGA TCCCAGTGGA TCAGTTTGGC
AAACTAGATC TTGAATTTAT TCAAAAAGAG GTCGGCAATG CATTAATGAT CTGCACCATG
GCGGTCAATA ATGAGACCGG TGTCTATCAA GATCTACAGC AACTTGAGCA GTGCATAAGG
GAGGGAAACT CTAAGGTATT TTGGTTAGTC GATTGTGTTC AGGCTCTGGG AAAACGCCCA
CTTAACTTAG CCAAAACCAG CATAGATTAC GCGCCATTTA GTGGACATAA ACTCTATGCA
CCTAAGGGAA TTGGTTTTAT CTATATACGT GAAGGTGCGC CCTTTACTCC CTTCATTGCA
GGCGGTGGTC AGGAGAGCGG ACTGCGCTCA GGCACTGAAA ACCTGCCAGG TATGGCAGCC
CTTAATGTGA TATTCCAGAT GCTGCTCGAC ACAGATAACA CGACTTTTTA CGATCTCAAT
ACACTGAACG ATTATCGTCG ACAGCTAAGT CACAGCCTAT CGCAAGCGTT TCCCGATATT
GTCTTTAACC ACCAATTTAA TAATAGTGTC CCCACCACAC TGAACTTCGC CGTTCCAGGA
TTTAGCAGCA AAGAGATTAT GGACCTGTTT GACGCTGCAA ATATCCGTGT CAGTTCAGGC
TCTGCCTGCA GCTCTAAAGT CACGCGAAGC TTTGTTCTCG ACGCCATGGG TTTACCTGTT
TGGCAGAGTG AATCCGCTAT TCGTCTCTCC TTTGGTCCCG CTATGACCCA AGAGGAGGTT
GATAGTGCTT GTGCAAGGAT CCGCTCAGCG GCCAAAGCAC TCACCAATAG CTGTTTAATG
CTCGATGACA CAGAGCAAAC ACAAGATAAA ACCCCACTCA ATGGTTTAGT GCAACTGCGC
TCCGGCTCTA GCTGTACCTG GGTCTATGCC GATATGAAGA GTAAACAGGC GCTGGTTATC
GACCCACTTC CTGAACTTGA GAAACGTATC GATACTCTGC TGCAATGTCA GCAGTTAACC
CCTGTCGCCA TCTTAGATAC ACACGGTCAT GCCGATCATA TCTCTGGACG AGTTGCATTA
GCCAATAAGT ACCTTAGCAC TCAACAAAGC GACGTTCTTG GCTGGCCAAC CAACACAAAA
AAAGTAGCCG TTGGTGATGA ATCATTTAGT GTGCTTACTA TAGGGGAGCT CTTTTTAGTC
AAGGTGCCGA CACCTGGCCA CACCGATGAC AGCATCAGCC TGTTATTAAG CTCAGATCCA
ATGAATTTAA TCACCAGTAC CCGCTATGCT TTTTGTGGGG ACACCATCTT AATGGGTAGC
CTAGGCCGAA CTAACTTCGC CTCCAGCAGC TCAATCGACA TGTACCATAG CCTAAAACAG
ATAAACCGCT TAATTGGCCA GCAAACCTTG CTATGCGCCA GTCATGACTA CAATAACGAA
TTTACTACCA CGCTCTCAGC TGAAGTGGTG CGCAATTGCC TGCTTCAATC AGTACTTACG
GGTTCAATTA ACCAATCCCA GTTTGCAGCA AGAAAAGCTG ATCTAGACTC AAATCTAAAT
GATGAGACAG GCACTGAGAT CCTATGTGGA GCCTACTATG GTGACTGCGA TAAAGCTCAA
ATTAAGGAGT ACAGTAGCGA TAGTCTCAAA CAGAGACTGA CAGTTTCCAG TGATGTGAAG
ATTCTTGATA TTCGTGAACC CCATGAGTAT GCACTGCAAC ATAAACTAGA TACAGTGAGC
GAGCAGAGTA GTACTGAAAA CAGCTTAAAT ACAGGCCTTA ATATTCCGAT GACACGTCTG
GTGCAATTCA TTCAGGAGCA TCAGATGGAG AAAGAGTCAG AGTGGGTGCT TGTGTGCCGC
AGTGGCAGTC GCTCTATGGT TGCGGCTCAA GCCATGTATC GACTTGGCTT TACGAATGTC
GCTCACCTAA AGGGCGGTTA TGCGTTAAGC AGCTAA
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| Protein sequence | MSQTTNLSQI YLDANATTPV LPQAAQAAMD AMQDLFGNPS SSHITGLKAK NLMEQTRQRA
KTLLGTGEGK LIFTSGATEG IQTGILSGLI KAKTQIKKGK KYSILYGSTE HKAVPNSLAH
WNEILGINAE IKAIPVDQFG KLDLEFIQKE VGNALMICTM AVNNETGVYQ DLQQLEQCIR
EGNSKVFWLV DCVQALGKRP LNLAKTSIDY APFSGHKLYA PKGIGFIYIR EGAPFTPFIA
GGGQESGLRS GTENLPGMAA LNVIFQMLLD TDNTTFYDLN TLNDYRRQLS HSLSQAFPDI
VFNHQFNNSV PTTLNFAVPG FSSKEIMDLF DAANIRVSSG SACSSKVTRS FVLDAMGLPV
WQSESAIRLS FGPAMTQEEV DSACARIRSA AKALTNSCLM LDDTEQTQDK TPLNGLVQLR
SGSSCTWVYA DMKSKQALVI DPLPELEKRI DTLLQCQQLT PVAILDTHGH ADHISGRVAL
ANKYLSTQQS DVLGWPTNTK KVAVGDESFS VLTIGELFLV KVPTPGHTDD SISLLLSSDP
MNLITSTRYA FCGDTILMGS LGRTNFASSS SIDMYHSLKQ INRLIGQQTL LCASHDYNNE
FTTTLSAEVV RNCLLQSVLT GSINQSQFAA RKADLDSNLN DETGTEILCG AYYGDCDKAQ
IKEYSSDSLK QRLTVSSDVK ILDIREPHEY ALQHKLDTVS EQSSTENSLN TGLNIPMTRL
VQFIQEHQME KESEWVLVCR SGSRSMVAAQ AMYRLGFTNV AHLKGGYALS S
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