| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0562 |
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| Symbol | |
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| ID | 6114796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 791910 |
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| End bp | 792848 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641632048 |
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| Product | ROK family protein |
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| Protein accession | YP_001758953 |
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| Protein GI | 170724927 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTTC CTTCACTTGT CACCCTTGAT ATTGGTGGCA CCAAAATCAA TGCAGGCCGT
TATGTTAACG GTGTAATAGA GGATTCACGA TCATTCAAGT TTTGCGCTAA TGCAAGTTTG
AGTGAAATTG AGTGTTTTAT TATTAACTGC ATTGATGGTT TTTTAATTCA AAGTACAACC
GCTATCTGCA TTGGTGTACC TTGTATTGTC GATACTCAGC TAGGGGTGGT TTATGACGCC
GTTAATATAC CCGCATGGAA AGAGTTTGAT CTCAAAAGTG CGCTTCAGCG GCGTTATCAT
TTAGATGTCT ATATCAATAA TGACGTTAAC TGTTTCACCG CAGGCGAACA TAGATTCGGT
GCAGGGCAAG GTTATGATGA CATCATAGGT TTATGCCTTG GCACAGGTGT AGGCGCAGGA
TATATTATTA ATAATGAGCT TTATCAAGGT CATAACTGTA GCGCAGGCGA AATTGGAGAG
GTCTGTTATC TCACTTCGAC TATTGATGAA TACTGCTCAG GGCGCTTCTT CGATCTACAT
ATAGGAGCTT CAGGCACTGA TCTGGCAGTA AAGGCAAGGT CAGGTGAAGC TTACGCTATT
GAAGCCTACT CTCAATTTGG TCGTCACTTA GCTCACGCTA TCAGCCATCT ACTGCTTATT
CTTGACCCTC AGGTGATCGT GATTGGCGGT TCTGTCGCTC ACTCATTCGA TCTCTTTAAA
GAGGAGCTAT GGCTAGGGCT TGCAGATTTT CCCTATAACA AGGTAATCGA AAACCTTAAA
ATAATCCCAT CGTCCAATAG AGATACAGCC CTGTTAGGTG CAGCCCAACT TTACCTTAAT
CAATGTAAAC AGAATAAAAA AACAGAGGTC ACAGCCCAAA TAGTTAACTC TAGAGAGGTC
TCAGCTGAGT CATACCTAAC ATCACCTCAA CCCTCTTAA
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| Protein sequence | MSFPSLVTLD IGGTKINAGR YVNGVIEDSR SFKFCANASL SEIECFIINC IDGFLIQSTT
AICIGVPCIV DTQLGVVYDA VNIPAWKEFD LKSALQRRYH LDVYINNDVN CFTAGEHRFG
AGQGYDDIIG LCLGTGVGAG YIINNELYQG HNCSAGEIGE VCYLTSTIDE YCSGRFFDLH
IGASGTDLAV KARSGEAYAI EAYSQFGRHL AHAISHLLLI LDPQVIVIGG SVAHSFDLFK
EELWLGLADF PYNKVIENLK IIPSSNRDTA LLGAAQLYLN QCKQNKKTEV TAQIVNSREV
SAESYLTSPQ PS
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