Gene Swoo_0548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0548 
Symbol 
ID6114782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp773183 
End bp773614 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content34% 
IMG OID641632034 
ProductMarR family transcriptional regulator 
Protein accessionYP_001758939 
Protein GI170724913 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTTTT TAAAGGAACT TCCAACCGAA GTAATGCTTG ATAAATACAC AAGTGATTTA 
ACAAATGGTG AGAAAAACTC AATAATTGAA GCTCTCAGAA TAATGAGACA AGCAAGCCTC
CTAATAAGGA GTATAGAAAC CTATTTTTCT GTTCATGATC TTTCACAATT AAGGTTTTTA
ATACTCATTG TTATTGATCG AGAGCCCAAT AGAAGCAGCC TCTATCCACA CGAAATAGCA
TCACGTTTAG ACGTGTCACG GCCAGTACTA ACGAGAACGT TAAAAAGTTT AATTGAGGAT
GGCTTACTGA CTTCGAGTAA TGATGAAACC GATAAAAGAG CAAAAAAAAT TACACTGACA
AAAAAAGGGG TTACCTGCTT ATCTAAGGTG ATTCCTGGGT ATTTCAATGA AATAAATAAA
TTAATGGAAT AA
 
Protein sequence
MFFLKELPTE VMLDKYTSDL TNGEKNSIIE ALRIMRQASL LIRSIETYFS VHDLSQLRFL 
ILIVIDREPN RSSLYPHEIA SRLDVSRPVL TRTLKSLIED GLLTSSNDET DKRAKKITLT
KKGVTCLSKV IPGYFNEINK LME