Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0517 |
Symbol | |
ID | 6114751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 733428 |
End bp | 733964 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641632004 |
Product | hypothetical protein |
Protein accession | YP_001758909 |
Protein GI | 170724883 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.13815 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACAATA ACGTCAAGGC ATTACTTGCC ACCACAGCCC TCTTCTTTAG CTGCCAAACA TTGGCCAGCA GTGGCTGTGC ATTCGAAGAT CAGCAAGATG GCATGATCGC CACATGTAGC GAGGAGAAAC AGGAAGTGAT TTTAACTGGA TTAGTAGAAG CGCAAACCAT GGTGACTGAG TTAGCGGATT TCACCCAAGG CTACAAGGAA TACCAAGTAG ATACAGCTGC AATCACGCCG CTAAAAAACC TAAAGGAACC TACTGAAATA GTGGTTATCA TAGGAACTTG GTGTCCTGAT TGTCACCGTG AAACACCACG CCTTATCCGT ATCATGGAAG AGATAAACAA CCCGAATATT AAGGTCACTT ATATCGGTGT CGACAGAGCA AAATCTGATC CACAAGGGCT AGCCGCCCAG TATGAGTTTA CCCGCATTCC AACGATTATT GTTAGCCAAC AAGGTGAAGA GCTAGGCCGT ATTATCGAAC GACCAGAAAC CTCACTTGAG ATAGACTTAG CTAAGATATT GAACTAA
|
Protein sequence | MNNNVKALLA TTALFFSCQT LASSGCAFED QQDGMIATCS EEKQEVILTG LVEAQTMVTE LADFTQGYKE YQVDTAAITP LKNLKEPTEI VVIIGTWCPD CHRETPRLIR IMEEINNPNI KVTYIGVDRA KSDPQGLAAQ YEFTRIPTII VSQQGEELGR IIERPETSLE IDLAKILN
|
| |