Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0507 |
Symbol | |
ID | 6114741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 720288 |
End bp | 721013 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641631994 |
Product | fumarate reductase cytochrome b-556 subunit |
Protein accession | YP_001758899 |
Protein GI | 170724873 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.572796 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00276017 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACAATAA AAACCCTACT TCCCACTTCG AGCTTTGCTG GTTTAACAGG TAACCCTTGG TCTGCTAAAG CGGATAAGAT ACAGAGTGCC ACTGGGTTGT TGCTCGGGTG TTTTCTACTG GCTCACCTGC ATTTTGAATC GAGCATCTTA CTCGGGAAAG ATGCTTTTTA TCAGGTGGTA CAGATTTTAG AGGGGGGCAT GTTTAGCGAG TCCGGCCATG GTTTTCCTTT AGTCACTAAG ATTTTCTCGG TATTTATTCT TCTTGTGGTG ATTTTACACG CCGCTGTTGC ATTGCGACGT TTTCCTGCTC AACTTGGCCA GTGGCGAGCG CTTCGTCGCC ATATGAATGG TATTAACCAT AAAGATAGCC ATGCTTGGTT CTGGCAGTTG GTAACCGGTT TTATTCTGTT TTTCTTAGCG CCAGTACATA TCTTTACCAT GATCACGAAC CCAGAGATTG GGCCACATCT GTCGGCTGAG CGTGTCTACC TAGATAACGC TTGGCTGCTC TATGCACTTT TGCTACCTGC CGTTGTCATT CACGCCATGA TTGGGCTTTA CCGCGTTGCA ATTAAGTGGG GCTTTACCGC TAATCGTACA GGTTTACGGA AAGTGATTAA ATTTATGATC ATCTACCTCA TCACAATTGG TGTGCTGAGC TTAGTGTCGT ACCTCTTCAT TGGTGCAGAG TTAACAACGC CAGTGCAGCC ATATGTACCT AACTAG
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Protein sequence | MTIKTLLPTS SFAGLTGNPW SAKADKIQSA TGLLLGCFLL AHLHFESSIL LGKDAFYQVV QILEGGMFSE SGHGFPLVTK IFSVFILLVV ILHAAVALRR FPAQLGQWRA LRRHMNGINH KDSHAWFWQL VTGFILFFLA PVHIFTMITN PEIGPHLSAE RVYLDNAWLL YALLLPAVVI HAMIGLYRVA IKWGFTANRT GLRKVIKFMI IYLITIGVLS LVSYLFIGAE LTTPVQPYVP N
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