Gene Swoo_0507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0507 
Symbol 
ID6114741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp720288 
End bp721013 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content46% 
IMG OID641631994 
Productfumarate reductase cytochrome b-556 subunit 
Protein accessionYP_001758899 
Protein GI170724873 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.572796 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00276017 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAATAA AAACCCTACT TCCCACTTCG AGCTTTGCTG GTTTAACAGG TAACCCTTGG 
TCTGCTAAAG CGGATAAGAT ACAGAGTGCC ACTGGGTTGT TGCTCGGGTG TTTTCTACTG
GCTCACCTGC ATTTTGAATC GAGCATCTTA CTCGGGAAAG ATGCTTTTTA TCAGGTGGTA
CAGATTTTAG AGGGGGGCAT GTTTAGCGAG TCCGGCCATG GTTTTCCTTT AGTCACTAAG
ATTTTCTCGG TATTTATTCT TCTTGTGGTG ATTTTACACG CCGCTGTTGC ATTGCGACGT
TTTCCTGCTC AACTTGGCCA GTGGCGAGCG CTTCGTCGCC ATATGAATGG TATTAACCAT
AAAGATAGCC ATGCTTGGTT CTGGCAGTTG GTAACCGGTT TTATTCTGTT TTTCTTAGCG
CCAGTACATA TCTTTACCAT GATCACGAAC CCAGAGATTG GGCCACATCT GTCGGCTGAG
CGTGTCTACC TAGATAACGC TTGGCTGCTC TATGCACTTT TGCTACCTGC CGTTGTCATT
CACGCCATGA TTGGGCTTTA CCGCGTTGCA ATTAAGTGGG GCTTTACCGC TAATCGTACA
GGTTTACGGA AAGTGATTAA ATTTATGATC ATCTACCTCA TCACAATTGG TGTGCTGAGC
TTAGTGTCGT ACCTCTTCAT TGGTGCAGAG TTAACAACGC CAGTGCAGCC ATATGTACCT
AACTAG
 
Protein sequence
MTIKTLLPTS SFAGLTGNPW SAKADKIQSA TGLLLGCFLL AHLHFESSIL LGKDAFYQVV 
QILEGGMFSE SGHGFPLVTK IFSVFILLVV ILHAAVALRR FPAQLGQWRA LRRHMNGINH
KDSHAWFWQL VTGFILFFLA PVHIFTMITN PEIGPHLSAE RVYLDNAWLL YALLLPAVVI
HAMIGLYRVA IKWGFTANRT GLRKVIKFMI IYLITIGVLS LVSYLFIGAE LTTPVQPYVP
N