| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0460 |
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| Symbol | |
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| ID | 6114690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 571736 |
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| End bp | 573046 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641631944 |
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| Product | sodium:neurotransmitter symporter |
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| Protein accession | YP_001758853 |
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| Protein GI | 170724827 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0733] Na+-dependent transporters of the SNF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCCG CAGGCTCCGC TGTTGGCGTC GGCAATATCT GGGGGTTTCC CACTCAAGCC
GCAACCCATG GTGGCGGAGC GTTTCTCCTC GTTTATCTGG TGCTTATCTT AATCCTCGGT
TACCCCATGC TGGTTGCAGA GTTGATGATT GGTCGCCACG GACAGACCAA CCCAGCCGAT
GCGATGGCAA AGATAGGCTC AGGTCCTGTC AGTAAAAAAA TAGGTAAGGC CATAGGTTTC
ATCTCTATCG CGACTGCGAC TTTGATCTGC ACCTTCTACA CCATACTTTC AGGCTGGTTT
GTCAGCTTCG CTTTAGCCCC CATCGCTGAG TTATTTGGCT TTGTAAAAGT ATCGAGCTGG
CTGATGGAGT TCTCGCTATC GCGTAATCTA GTATTCACCA CTTTGTTTAT CTTGATGGTG
GTATTCGTGA TACGCCAAGG GGTACAGCAA GGGATCGAGC TGTGGTCAAA AAGATTAATG
CCGCTACTGC TGCTTATCTT AGTGATGGGG GTGATCTACA TCTTAACCCA GACCGGTGCC
ATGACAGGAT TAGAGGTGCT GTTGGTTCCA GACTTCTCTC GAGTATGGGA GCCGGATGTG
CTGATTGGCG CACTGGGACA GACCTTCTTC TCACTCACCA TAGGCACAGG AGCCATGATG
GTTTACGGTG CATACTTAAG TAGGAAAGAG GATCTAGGCA AGCTAACCGC ATACGTCACC
CTAACAGACA CCAGTGTCGC CTTTTTAGCC GCCTTAATGA TTATTCCAGC CATGTATGTC
GCACAGCATA ATGGCGTGCA GATATTTGCA GAAGATGGAA GCTTACTTAA CTCAGACACC
TTAGTGTTCA CTGTACTGCC TGCACTATTT GAGACCTTAG GCGGCAATCT ACAGTACCTG
TTGGCATTCG TGTTTTTTAT CTTGATGACC ATAGCGGGAC TAACATCGGC TATCTCAATT
GTTGAGGTGC CCACCAGCTA TTTGATGGAG AAAAAATCTA TCAGTCGCAA CAAGGCTACT
TATTTAATTG GCGCACTTGT GGTCGTGCTG TCGCTAACTG TGGTACTGAA CTTCGAGCAA
CTGTTTAGCT TTATGATCAC GCTAACCACA GAGCGAGCTC AGCCCCTTAT CGCCCTAGGC
ATCGCAATCT ATCTAGGTTG GGTGTGGCAG AGAAATGATC TGCTAAAAGA TATTCAAGCT
CAAGAGGGGG CTGACAGCAA CAGCATCTTC TGGCGCATTT GGCCTGTGTA CGTCAAGTTT
GTCTGCCCTG CACTTATCAC GCTTATTATC ATTCAGCTGT TTAATAGCTA A
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| Protein sequence | MAAAGSAVGV GNIWGFPTQA ATHGGGAFLL VYLVLILILG YPMLVAELMI GRHGQTNPAD
AMAKIGSGPV SKKIGKAIGF ISIATATLIC TFYTILSGWF VSFALAPIAE LFGFVKVSSW
LMEFSLSRNL VFTTLFILMV VFVIRQGVQQ GIELWSKRLM PLLLLILVMG VIYILTQTGA
MTGLEVLLVP DFSRVWEPDV LIGALGQTFF SLTIGTGAMM VYGAYLSRKE DLGKLTAYVT
LTDTSVAFLA ALMIIPAMYV AQHNGVQIFA EDGSLLNSDT LVFTVLPALF ETLGGNLQYL
LAFVFFILMT IAGLTSAISI VEVPTSYLME KKSISRNKAT YLIGALVVVL SLTVVLNFEQ
LFSFMITLTT ERAQPLIALG IAIYLGWVWQ RNDLLKDIQA QEGADSNSIF WRIWPVYVKF
VCPALITLII IQLFNS
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