Gene Swoo_0453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0453 
Symbol 
ID6114683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp562213 
End bp562866 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content47% 
IMG OID641631937 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_001758846 
Protein GI170724820 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3751] Predicted proline hydroxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTAC ATACAGGGCT AGAGATAGAT CCGAGCATGG ATCAATACAC CTCGTTATTT 
GAATCAATCG TACAGGATGT TGCTGATAAT GGTTACAGCA TTAAAACCAA CGCCTTACCG
GTTGAGTTGG CTCAAAAACT GAGTGCGCGA GCGCAAGCCA TATCAGACAC CCACTTTAAA
GCGGCAGGCA TAGGTCGAAG CAATGAGCTG ATGCTAGATA CTCAGATCCG CAGCGACGAG
ATCTGTTGGA TTGTTGGCGA CAGTGAGCTC GGTGCGAGCT GGTTAAACTG GGTTGAGGGA
CTGAAACAGT ACGTCAATCG TACGCTATTT TTGGGACTCG ATGAGTTTGA AAGTCACTTT
GCTCACTATA GCGAAGGGGA TTTTTATCAA AAGCATAAAG ACGCGTTCCG TGGTGAATCA
AACCGAATTC TAACCTTAGT GGCATACCTC AATGAGGATT GGAGTGAAGA GTGTGGCGGC
GAGCTTCTGG TCTATCCCGA TGACTCAGAT GAGGTGATAG CCAAAGTTGC TCCTCATTTC
GGCACTATTG TGGTCTTTAT GAGTGAAGAG TTCCCCCATG AAGTACTGCC AGCTAAGTGC
GATCGCTACT CTATCGCCAC TTGGTTTAGA CGTAAGTCAG ATAAGTTGAG TTGA
 
Protein sequence
MALHTGLEID PSMDQYTSLF ESIVQDVADN GYSIKTNALP VELAQKLSAR AQAISDTHFK 
AAGIGRSNEL MLDTQIRSDE ICWIVGDSEL GASWLNWVEG LKQYVNRTLF LGLDEFESHF
AHYSEGDFYQ KHKDAFRGES NRILTLVAYL NEDWSEECGG ELLVYPDDSD EVIAKVAPHF
GTIVVFMSEE FPHEVLPAKC DRYSIATWFR RKSDKLS