Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0453 |
Symbol | |
ID | 6114683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 562213 |
End bp | 562866 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641631937 |
Product | 2OG-Fe(II) oxygenase |
Protein accession | YP_001758846 |
Protein GI | 170724820 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3751] Predicted proline hydroxylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGCTAC ATACAGGGCT AGAGATAGAT CCGAGCATGG ATCAATACAC CTCGTTATTT GAATCAATCG TACAGGATGT TGCTGATAAT GGTTACAGCA TTAAAACCAA CGCCTTACCG GTTGAGTTGG CTCAAAAACT GAGTGCGCGA GCGCAAGCCA TATCAGACAC CCACTTTAAA GCGGCAGGCA TAGGTCGAAG CAATGAGCTG ATGCTAGATA CTCAGATCCG CAGCGACGAG ATCTGTTGGA TTGTTGGCGA CAGTGAGCTC GGTGCGAGCT GGTTAAACTG GGTTGAGGGA CTGAAACAGT ACGTCAATCG TACGCTATTT TTGGGACTCG ATGAGTTTGA AAGTCACTTT GCTCACTATA GCGAAGGGGA TTTTTATCAA AAGCATAAAG ACGCGTTCCG TGGTGAATCA AACCGAATTC TAACCTTAGT GGCATACCTC AATGAGGATT GGAGTGAAGA GTGTGGCGGC GAGCTTCTGG TCTATCCCGA TGACTCAGAT GAGGTGATAG CCAAAGTTGC TCCTCATTTC GGCACTATTG TGGTCTTTAT GAGTGAAGAG TTCCCCCATG AAGTACTGCC AGCTAAGTGC GATCGCTACT CTATCGCCAC TTGGTTTAGA CGTAAGTCAG ATAAGTTGAG TTGA
|
Protein sequence | MALHTGLEID PSMDQYTSLF ESIVQDVADN GYSIKTNALP VELAQKLSAR AQAISDTHFK AAGIGRSNEL MLDTQIRSDE ICWIVGDSEL GASWLNWVEG LKQYVNRTLF LGLDEFESHF AHYSEGDFYQ KHKDAFRGES NRILTLVAYL NEDWSEECGG ELLVYPDDSD EVIAKVAPHF GTIVVFMSEE FPHEVLPAKC DRYSIATWFR RKSDKLS
|
| |