Gene Swoo_0450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0450 
Symbol 
ID6114680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand+ 
Start bp555196 
End bp555801 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content43% 
IMG OID641631934 
ProductTetR family transcriptional regulator 
Protein accessionYP_001758843 
Protein GI170724817 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAA AAATATCACG TTCTGAGCTA AAACGTCGTG CCATCATAGG TGCTGCCATG 
TCTGAGTTTC AGACTAAAGG GTTTAAAGCG ACCAGTATGG ATGATGTGGC CAAACGTGCT 
GAAGTGTCTA AGCGTACGGT TTATAACCAC TTTTCAAGTA AAGAAGCACT GTTTAGTGCA 
ATCATTTTGG AGATGATGGC ACTCTTGTGT GCATTTGAGT ATTTTACTTT CTCAGATGAT 
ATTGCTCTTG AGGTTCAGCT AGAAAAACTA GTGGATATAG AGGTTGAGCA GTTAAAGTCT 
CAGGCATTTA TGGATATGGC TAGGGTGATT ATCGCTGAAG CTGTGCACTC TCCAGAGTTG 
ATCCAAGGTG CAATGGATGA GTTTAATAAG CAGGAAACAC CGCTAAACAC ATGGTTTCAA 
GCTGCTTTAG AAGCTGGAGC GCTTAAGGGT CAAAGCCATG AGATCATAGT GACGCAATTT 
GTTGGGGTGA TTAAGGCCTT CTGTTTTTGG CCTCAGTTGC TGCAAGGGGC TGCATTTCCC 
TCTGATGAGG AGGTGGTAGC GATAAAGAAA ACAGTGGTTG AGATGGTATT GAAGCAATAC 
AGCTAG
 
Protein sequence
MDKKISRSEL KRRAIIGAAM SEFQTKGFKA TSMDDVAKRA EVSKRTVYNH FSSKEALFSA 
IILEMMALLC AFEYFTFSDD IALEVQLEKL VDIEVEQLKS QAFMDMARVI IAEAVHSPEL 
IQGAMDEFNK QETPLNTWFQ AALEAGALKG QSHEIIVTQF VGVIKAFCFW PQLLQGAAFP 
SDEEVVAIKK TVVEMVLKQY S