| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0440 |
|---|
| Symbol | |
|---|
| ID | 6114670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 540337 |
|---|
| End bp | 541209 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641631924 |
|---|
| Product | DNA-binding transcriptional regulator IlvY |
|---|
| Protein accession | YP_001758833 |
|---|
| Protein GI | 170724807 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.76505 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATATAA AAACCATAAA GCTCTATCTG CACCTTTCTG AAAGCCTGCA CTTCTCACGC
ACGGCTCAGG CGATGCATGT CAGTCCTTCG ACACTCAGTC GCGCCATGCA GAGGCTGGAA
GATGAGGTGG GTGCCAAACT ATTTCAGCGA GATAATCGCA GTGTTTCCCT TACCAGTGCA
GGCGTTGAGT ACCGTCACTT TGCCGAGCAG ACACTCGATC ACTGGAGTAA GCTCAAAACA
AAGATTGATC CTAAGCAGGA CCTACTTAGG GGCAGGCTTA ACCTCTACTG CTCTGTAACT
GCTGCCTATA GTCACCTACC GGGCTTGCTA GACAGTTTCA GACGCGAACA TCCCTTAGTG
GAGATAGCCC TAACCACAGG TGATGCGGCG AATGCCGTGA ATGAAGTGAA AAATAATCGC
GCCGATGTTG CCATCGCAGC CCTGCCAGAC CCTTTTCCAG ATAGCTTACA CTTCGTCAAG
ATAGACGATG TTCCTCTCGT CATTATCGCC CCCACCTACC GGTGTCAGGT TCAGGAACTA
CTTAGCGAAT CTTATATTCC CTGGGATCGA CTTCCCTTTA TTGTGCCAGA ACATGGGCCG
GGTAGACGCA GGGTCGATAA TTGGTTTAAG CAATTGGGCC TTAGCCCAAA CATCTATGCT
CAGGTTTCGG GCCAGGAGGC GATCGCCTCT ATGGTCGCAC TAGGGTGTGG CGTCAGCATC
ACGCCTGATG TCGTGATCAA TAACAGCCCA GTTCGAGATC GCATACAGAT CATCCCCTCA
CCCATAGAGA TCCCCCCCTT TGAACTTGGT TGCTGCTGTA AAACCAAGAG TCAGAAAGAT
CCAATCATCT CGGCTTTTTT GAAAGTTTTA TAG
|
|---|
| Protein sequence | MDIKTIKLYL HLSESLHFSR TAQAMHVSPS TLSRAMQRLE DEVGAKLFQR DNRSVSLTSA
GVEYRHFAEQ TLDHWSKLKT KIDPKQDLLR GRLNLYCSVT AAYSHLPGLL DSFRREHPLV
EIALTTGDAA NAVNEVKNNR ADVAIAALPD PFPDSLHFVK IDDVPLVIIA PTYRCQVQEL
LSESYIPWDR LPFIVPEHGP GRRRVDNWFK QLGLSPNIYA QVSGQEAIAS MVALGCGVSI
TPDVVINNSP VRDRIQIIPS PIEIPPFELG CCCKTKSQKD PIISAFLKVL
|
|---|
| |