Gene Swoo_0426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0426 
Symbol 
ID6114656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp526371 
End bp527918 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content46% 
IMG OID641631910 
Productprotein-disulfide isomerase-like protein 
Protein accessionYP_001758819 
Protein GI170724793 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGAT CCACTCTCAA TCTCAGCCTG ATACTTGCCC TACTGCTAGT CGCTTGCAGC 
GATTCTGAGC AACCTCAACT TTCCTCAACT GAGCTCAATG AACGCAAAGT CAGCAAGCAG
CTTGATATCG ACTCAGGAAA CAGGCACCAG CAAATTGTCG CAACCATAGA CAATGAACCC
GTTTTAATGA CTCAAATAGA CAGCAGTATC CAATTAAAGC TGTTCGATCT TGAATGGCAT
AAATATCAGT TAAGAAAAGC CGCGTTGGAA ACGGCAGTTG CCTCAAAAGT AGAGCAGCAA
CTCACTAAAT CAACGGCACC TCACGTAGAG ATACTGCTAA CCCCTCCTGC CGCACCAAGG
TTTTTCCTAC CAGATACCGA TAAGCCGATA AAAGGTGATC CAGATGCAGT AGTAAAGCTC
TCACTGTTTT GCAGCTTTCA GTCCTCCCAC TGTGCTCGAC TACAACCTGA GCTCAGAACG
CTAGAGACTC GATATGGCGA ACTCATTAAC TTAGTCTTCT ACGATCTACC ACAAACCTTT
CATCGTTACG GCAAAGCCGC AGCGAATGCC AACCTCTGCG CAGCAGAATC AGGCAGCCAA
TGGGCATATC AAGAGGCGCT ATATAGCAAC ATTAATCAGC TCAATCGAGA ACGCTACCTT
ATCATCGCCA ATCAACTTGG TTTAGATAGC AAAAGCTTTA GCCAATGTAT CGATCACAAC
CAATATCAGG ACAAGTTAGA CTCAGACCAA GAGTTAGCCC AACGTTTAGG CCTTGGCAAT
GTGCCGGTTC TGTTCGTCAA TGGCTTGTAC ACTAAAGGCG CTAATACCGC AGATGGCTAT
GGTTACTACA TCAATCAGGA GCTGATCCGT TTAGGTCTAC CAATTCCCAC GACTCTGCCC
CTTCGTTTAG TCTCGACTTC AGTCAAAGAT CCTACAGAGG ATTCAAGAGC CAAACTTCAA
GATCTTAATA ACCAAACACT GACCGAATAT AAGCATGGCG ATGGCCTAAA TCTGGTTAGC
AGACGTGGTG TAAATTTAGA TGTGACCTTA ACCGCCATTG AGTCACAACG AGTATTACTC
AACAACAATG GTCAAAAGGA GTTTCTACGA CTAAGCCAAG GTCAAGATAA ACCCGCAACG
GTCAGTATGA CTCCTGCCAG CAACTCATCA CGAGACAGCT CAGTCAGTAG AGAGCCAAGC
AGTGCTCAAG TACAAAGGAT TGAGCAACTT CCCACTACGG CCAAGATGCA ACTATCTAGA
AACTGGCTCT CAAAGCACCT TCAAAACAAG CAGCAACTGG CCCAACACTT TCAAGCAACG
GAGCACCAGA TTGAAGGGGT TCACTTGCTA AAGTTAACGG ATATCGACAG AAATGAGTTT
TATAAAACCT TAGGACTTCA ATCTGGAGAT GTAGTACTTC AAGCCAACAA CCAATGGGTA
CATGAAGGCT CGAACCCCCT ATGGGATGCA CTCGGTCAAA ATGAGATCAC CCTATTAGTG
ATGAGGGAGG GTCTTCCCCT ACGCTTTGAC TACAAAACGA AACAATAA
 
Protein sequence
MQRSTLNLSL ILALLLVACS DSEQPQLSST ELNERKVSKQ LDIDSGNRHQ QIVATIDNEP 
VLMTQIDSSI QLKLFDLEWH KYQLRKAALE TAVASKVEQQ LTKSTAPHVE ILLTPPAAPR
FFLPDTDKPI KGDPDAVVKL SLFCSFQSSH CARLQPELRT LETRYGELIN LVFYDLPQTF
HRYGKAAANA NLCAAESGSQ WAYQEALYSN INQLNRERYL IIANQLGLDS KSFSQCIDHN
QYQDKLDSDQ ELAQRLGLGN VPVLFVNGLY TKGANTADGY GYYINQELIR LGLPIPTTLP
LRLVSTSVKD PTEDSRAKLQ DLNNQTLTEY KHGDGLNLVS RRGVNLDVTL TAIESQRVLL
NNNGQKEFLR LSQGQDKPAT VSMTPASNSS RDSSVSREPS SAQVQRIEQL PTTAKMQLSR
NWLSKHLQNK QQLAQHFQAT EHQIEGVHLL KLTDIDRNEF YKTLGLQSGD VVLQANNQWV
HEGSNPLWDA LGQNEITLLV MREGLPLRFD YKTKQ