| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0378 |
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| Symbol | |
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| ID | 6114608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 473968 |
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| End bp | 474684 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641631863 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001758772 |
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| Protein GI | 170724746 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAA CAGTTGTGAT CACCGGAGCA AGTCGTCGAT TAGGTCTCTT TCTAGCAGAG
CAGTTTATTG CCAGAGGAGA TAGGGTTTTC GCGGTATCAC GAAGTACCTC TAATGAGTTT
ACCTCTATCG ATTCAGCAAA CTTTCATGCA GTTCAAATTC ATGGTTACGA TAAGCTAGGT
GTTGAGCAAG CTGTTACAGC CATAAAGCCA CAAGTGAGTC ATATCGATCT ACTCATCAAC
AATGCTTCTG TCTTTGAAGC GGATCCAAAA GACAATCAAG AGATTGAATC TAAACTGACC
CTTTTTTTTC AGATCCATAT GCTCTTTCCT AGCCTACTAA CTCACGAGCT AGCCCCCCTC
CTCTTTGATG AGAAGACCCC CGGATTAGTG GTGAATATGA CAGATATCTA CGCTGACAAC
CCTAGCCATC AACACTCACT CTACTGTTCA ACTAAGGCGG GACTTGAGAA CCTCACGCGC
TCCTTCGCCA AAAAGTTCGC ACCAGGCATA CGCTGTAACT CAATTATGCC AGGGCCACTT
AAGTTCCTAC CCGAACATAG TCAAGCACAA AAAGAGCAAG TGCTTAACGC GACCTTACTC
CCCTTTGAAG CCGGATTTAA TCCTGTATTT CAGACCATAG AGTTTATTCT GGCTAACCCC
TTTGTGACTG GAACCGCCAT TAAGGTTGAT GGAGGCAGGT CCATCTGCCG AGGGTAG
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| Protein sequence | MMKTVVITGA SRRLGLFLAE QFIARGDRVF AVSRSTSNEF TSIDSANFHA VQIHGYDKLG
VEQAVTAIKP QVSHIDLLIN NASVFEADPK DNQEIESKLT LFFQIHMLFP SLLTHELAPL
LFDEKTPGLV VNMTDIYADN PSHQHSLYCS TKAGLENLTR SFAKKFAPGI RCNSIMPGPL
KFLPEHSQAQ KEQVLNATLL PFEAGFNPVF QTIEFILANP FVTGTAIKVD GGRSICRG
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