Gene Swoo_0290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0290 
Symbol 
ID6114516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp357930 
End bp358661 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content48% 
IMG OID641631774 
Producthypothetical protein 
Protein accessionYP_001758686 
Protein GI170724660 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.569301 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAT TCAAAACTCT ACCACGAAAT AAACTCCTTC TCGTGGCTGC AATATCTTCA 
AGCCTGTTCC TCAGTGCCTG TTCCGATAGT GATAATACGC CAGAGGTCAC CCCTCCAGCA
CCACCGGCGC CTGTGGTTAA TCAAGTTTAT AGCGTAACGG TGACAAACTT AACGGCCAAC
CAGCCAATGT CTCCCATTAC TCTTATTGCA CACGGTGACA TATCAGCTTG GCAGGTTGGC
TCCCCTGCAA GTCTGGCGCT AGAGACAATA GCAGAGTCAG GTGATGGTTC ACTTTTCTCA
TCGATGGATG ACGTAGATAG CGTCACCGTC GGAGCAGGTA TCTTGCCTCC AGGCATGTCT
GAGAGTATAG AGCTTAGCCT CGCCCCTGAT GATGTTGATT CTTTATCCAT ACTCACCATG
TTGGTCAATA CCAATGATGC TTTTGCAGGT CTCAATGACT TTTCATTAGG TGAGCTAGCA
GTTGATCAAA CCATAAGATT TAGGTCAATC GCTTACGATG CAGGTACCGA ATCCAATTCT
GAAGCAAAAG GGACTCTTCC AGGACCTGCT GATGGTGGAG AGGGGTTTAA TGCTATGCGT
GACGATGTTG ACAGGGTGCA CGCTCATCCA GGGGTGATAA GTCAAGACGA TGGGCTAACA
GACTCAGTTC TCTCTGCATC CCATCGATTC GACAATCCAG TCCTCAGCAT CATGATAAAC
CGAACTCAAT AA
 
Protein sequence
MNTFKTLPRN KLLLVAAISS SLFLSACSDS DNTPEVTPPA PPAPVVNQVY SVTVTNLTAN 
QPMSPITLIA HGDISAWQVG SPASLALETI AESGDGSLFS SMDDVDSVTV GAGILPPGMS
ESIELSLAPD DVDSLSILTM LVNTNDAFAG LNDFSLGELA VDQTIRFRSI AYDAGTESNS
EAKGTLPGPA DGGEGFNAMR DDVDRVHAHP GVISQDDGLT DSVLSASHRF DNPVLSIMIN
RTQ