| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0265 |
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| Symbol | |
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| ID | 6114488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 321747 |
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| End bp | 322685 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641631746 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001758661 |
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| Protein GI | 170724635 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000318169 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATCTCG CTAAACTCTC ACGGATCAGC ATGAAACATC TGATCACCCT GCATGTCATG
CTAGACACCT TAAGTGTGAC CGCCAGTGCC GAGCGGCTAT GCTTAAGCCC ATCATCGGTC
AGTAAAACTT TAAGTCAGTT AAGATTGAAC TTAGATGACG AGCTGTTCTA TCGTCATGGC
AACAAGTTGG TGGCAACACA GTTAGCCCGT CGTTTAGGCC CCGCTGTGCA TCAGATCATC
AATGATATGA ATCAGATCAT GACTCAGGAG GTCTTTAATC CAGCTGTGTA TGAGGGCCGT
TTCTCTCTTG CTATGCGTGA GAGCACCTTT GAGCTGCTTG CGGCCAAATT GAGCGCCCAT
GTACTTAACT TAGCGCCGAA TATTCGTTTA GATATCCACT TTAAAAACAC GGTTGGCTTC
GATGGACTGG TAAAGGGAAC ATTGGATTTT ATAATCTTAC CCCACGACCT AAGCCAGCCA
CCTATCGCCC GTAGCGAGTT AGTGTGGGAG ACGCTGATTA ACGATGAGAT GGTGTGTTTA
ATGAATGCAT CGCACCCACT TGCTATCAAG TCGCAGCTCT CTATCGATGA TTACCTAAAC
TACAGTCATG TCGGTATTAG CGACACCGAT CTCAATATTC CATTCTTTGA GATGCAACTT
GCGCAGCAAC AGCGCAGCCG GGCAGTGCCT ATATCTGTGG CAGATTTTGG TAGTGCAGTT
TTAATGTGCC ACCACAGTGA ACTACTGTTC ACTTGCTCTC GACGTTGGGC TGAAAACGCT
TTTCAAGCTA ATGGGTTAGT GACTAAGCGT CTGCCCTTTG ATTATGGCGA GGTCGCTTAT
AGTTTGGTGT GGCACAGGCA GAGTATGAAT GACCCTGCAT TGCGTTGGCT GTATGAGCAG
ATAGTTGGGT TTACCACAAA GTTGGGAGCC TTCGAATGA
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| Protein sequence | MDLAKLSRIS MKHLITLHVM LDTLSVTASA ERLCLSPSSV SKTLSQLRLN LDDELFYRHG
NKLVATQLAR RLGPAVHQII NDMNQIMTQE VFNPAVYEGR FSLAMRESTF ELLAAKLSAH
VLNLAPNIRL DIHFKNTVGF DGLVKGTLDF IILPHDLSQP PIARSELVWE TLINDEMVCL
MNASHPLAIK SQLSIDDYLN YSHVGISDTD LNIPFFEMQL AQQQRSRAVP ISVADFGSAV
LMCHHSELLF TCSRRWAENA FQANGLVTKR LPFDYGEVAY SLVWHRQSMN DPALRWLYEQ
IVGFTTKLGA FE
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