| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0249 |
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| Symbol | |
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| ID | 6114472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 302961 |
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| End bp | 304376 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641631730 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_001758645 |
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| Protein GI | 170724619 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0389446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTAACTG ATGTCGAATT CGTTGCTCAT TTCTCACCTG AGTTAGGTCA GGATTATCGT
GTTGCAAAAA GTTATGTGAC CGATGTGCCA ACCCAAGCGT TACTTCAAAT ACGTAGTCTT
ACCCATAAGC TCACCGAGCT GTTGGCCCTA CCTATGGGGA TTACTTTTGA TAGTCCTAAC
CTTTATGACA GAATTGAGAC CCTGAACAGT AGGCGGGTTA TTAATGTCCG TGTTACTAGG
GCAATGCATA AGCTGCGCGG GGATGGAAAT CGTGGTGCAC ATCCCGAAAA ATATCACCTT
ACCTCTGAGC AGTTACAGCA ATTAAGTGAG AAATCCATAG AGAGGCTGTT GAGTTTAATC
GAGTCTCTCT TCGTTCAAGT AACGGGAAAA TCGCTTCCCA AATATCATTT TGAAGCCTTC
GACTCTTTGG CCGGACGGGA TCTCTGCTAC CGAGCTGTGA TGGAGTCCGA TCCTCAAGCT
CAGTATCTTG TGGGCATGTC GCTTAAGACG CGAGCCTTGA TGCAGCGAGA GCAGGAGCTG
GCCTTAGGTG ACGAGCATGA TGGAAAGGGA TCTGAGCTAG GCTCCTCCTC TGAGACCCTT
AAAAAAGCGG AATATTGGTT TGGCCTAGCA TCAACAAGTG AGATGGATGC TCGATATGAG
TATGGTGTTG CTAAGATCCA TGGCTACAGC GGTGAACCTG ATGTTATAGC CGGAGAAGAG
GCGATAGCAC AGGCGGCTGC AGCGGGAGTT GTTAATGCCA TGGCGCTGCT GGGCTACTTC
TATCTCGTGG GAGGCAAGAG CTTAGCTGTC GATAGGGATA AGGCGTTGGA TTATCTGCAA
CGGGCCGCGG ATCTTGAGCA GTCAGAAGCG ATGGCGAACC TTGGTGTGCT CTATTATCAA
GAGGGGGCAT TGACTCAGGC TTATCAATTT ATCGCTAAAG CCGCTCAGGC AGGGTTTCCT
CATGCCCAAT ACCATTTGGC TTTAATGCTC GCCAGAGGTG AAGGCTGTGA AGTCGATCCC
CTTGGGAGTG AGCAGTGGAT GGCGGAAGCG GCTGAACTGG GTCAGATCGA TGCCATGTTC
TCCCGTGCGC AATCCATGCT AAACGATGAT AATGCATTTG GAACCGATCT CTCCCAAGCT
GAGCTTTATC TTCGTGAAGT GATCAAGTAT GGACACAGTG TGCCGGCCAT GATTGAGCTT
AGTATCGCCC TTGCTGATGG GGTATTGGGC AGAATTGATG TGGTGGGAAG TGCATCCTTA
CTCAAGTTGG CCCGTGAACA TGGTAATGAG CATGAGCTAT CAGTGATCTC CCCCCTTTGG
GACTCACTTT CTCAGCAAGT TGAAAATGTG ATTGCCGTGA CTAAGAACAA GGCTGAGTTG
GTTGCGTTAA AGCGGGCACA AGAGTTACTA GCTTAG
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| Protein sequence | MLTDVEFVAH FSPELGQDYR VAKSYVTDVP TQALLQIRSL THKLTELLAL PMGITFDSPN
LYDRIETLNS RRVINVRVTR AMHKLRGDGN RGAHPEKYHL TSEQLQQLSE KSIERLLSLI
ESLFVQVTGK SLPKYHFEAF DSLAGRDLCY RAVMESDPQA QYLVGMSLKT RALMQREQEL
ALGDEHDGKG SELGSSSETL KKAEYWFGLA STSEMDARYE YGVAKIHGYS GEPDVIAGEE
AIAQAAAAGV VNAMALLGYF YLVGGKSLAV DRDKALDYLQ RAADLEQSEA MANLGVLYYQ
EGALTQAYQF IAKAAQAGFP HAQYHLALML ARGEGCEVDP LGSEQWMAEA AELGQIDAMF
SRAQSMLNDD NAFGTDLSQA ELYLREVIKY GHSVPAMIEL SIALADGVLG RIDVVGSASL
LKLAREHGNE HELSVISPLW DSLSQQVENV IAVTKNKAEL VALKRAQELL A
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