| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0213 |
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| Symbol | |
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| ID | 6114436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 263314 |
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| End bp | 265644 |
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| Gene Length | 2331 bp |
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| Protein Length | 776 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641631694 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_001758609 |
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| Protein GI | 170724583 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000121403 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACGAAA AAGTAAAATA TAATAACTAT AGCAACAGCA TTATTGTACT GTCTTTGTTA
TTCAATGCGC CTGTATTTTC TGAAGAAAGT GATAAAAAAG AGAAAAGCCA AACACTCGAA
GTGATTACGG TGACCGCGCA AAAAAGAGTT GAATCACTAC AAGAAACACC TATCGCAGTG
ACCGCATTTA CCGCCGATGG CCTTGAAAAA ATGCAAGTTG GCAATATTGC AGAAATAGAA
AATTTCACCC CCAATTTAGT GTTTGATACC TCATCTCCAA TAGGTGGCTC ATCAACCAGT
GCGGCCGTTT TCATACGCGG GATCGGCAAT ACAGACTTCA GTTTAACCAC AGATCCAGGT
GTAGGGACGT ATATTGATGG CGTATATGTC TCTCGTTCTA TCGGTGGCGT ATTAGATCTC
CTTGATGTTG AGAGAATAGA GGTGCTGAGA GGACCACAAG GCACCCTATT TGGCCGTAAT
AGTATTGGTG GGGCTATTAA TATTACTACG CGTAAGCCAT ATGATGAGCT TGCTGGCCGT
TTAGATCTCA CTTTGGGTAG CTTTAATCGA ACTGATGTTC GTGGCTCAAT TGATATTCCT
TTTACAGACG AATTACTGTC CACATTTGCC TTTTCAAGTA AACGCAGAGA TGGCTTTGTT
GAACGCCCGC TCATAGGCGA TGAACTCGGT AATGAAGACC AACTTGCGTT TCGTGGAGCC
TTATATTACG AACCCAATGA TGAGTGGAAT TTTCAACTCT CCTTTGACCA TTCAGATATA
GACGAAGAGA GTGCAGCTAA TGTCGCCGTG GGCTTTACCC CTGGTGCAGG CACAATAGGT
TGGGCACTGG CGACCTATCC AACATTATCA CCAGATGCGG CAATCGTTGC AGGACTTAAA
GACTTAGACA AATACATAAC CAAAGATGAT AAAGACGTAT CCTATGGAAC ATACAACAAT
GGCAGCAGCG CAACGGTAGA TGGAGCCTCA TTTGTCGCCA ATACTCATCA AGACAATTTT
GACCTTAAAT ACACTGCAGC ATATCGTAGA ACGAAGGCTG CATTCCATGC AGATGCCGAT
AACACGCCAT TTCAAATTAC CGAGATTTCA AACCCAGATT ATTATCATAA GCAGATTAGT
CATGAGCTTC AGTTCTTGGG CACCGCTATG GATGACCAAA TCAAGTACAT TGCTGGGGTC
TATTACTTTG ATGAAAGCGG TACTGATAAT GTGTTTGTTC CACTGCACCT ACCAACCCCA
GATTTAAGCG CTGGTTTCCC TGCTGGGTTA AATAACTATG CCGACGTTGA GAACTCTAGT
CTTGCTGAAT ATTTACAAGC AACTTGGGAT ATTAACGACA CATTCTCAGT CACGGCAGGT
GTTAGACACA CACTAGATAA AAAGCAATTT GATTATACCC AGTACCTTGC TGCTGACATT
CAAGGCAATC CGTTACCGTT TTTCCCTGGT GCTGTTGATG AAACAGGTAC ATTTCGCCCC
GGACTCTCAC CATTAGTGGG CAATGGCAGT GGCTCTATTT CTGATAATTT TGAGCAGACA
ACATTTAAGC TTGGTGTTGA TGCCATATTA GATGACGGCA CTCTTCTGTA TTACAGCTTC
TCTCAAGGAT TCAAAAGCGG AGGGTTTGTT TTACGCTACG TAGAATCGGT AGCCGCACCT
CGTACCTTTG AACCAGAAAC CTTAGATGCA CATGAAATAG GAATCAAATG GCAAAGTGAT
AATGAGCGTA TCCGAGTCAA CGGCGCGGTG TTCTATTCAG ACTATCAGGA TGCACAAGTC
ACCTTTTTTG ACAAACTCGG CGGGCCAATT ACAGCCAACG CTGGAGAGAT TGACATTAAA
GGCGTAGAGC TTGAGATAAC CGCCTTAATC ACAGACGATC TCATTCTTGA TATTGGCTAC
GGCTACATTG ATGCAGCATA CAATAACATC AATCCCGTTG AAGGTTTATC ATTGACCTTA
GATAAGTCCG CTAAGCTAGT AAATACACCT GAGAACTCAT TACACATTGG TTTAGATTAC
AGTCTTTACT TCGATGAAAG CGATATCGCT TTCAGAGTTG ATTATGCGTA TACCGATGAT
GTATTTAATG ACTCTCAAAA CTCAAAATTT CTATTTCAAG AAGCCCACGA CATGTTTAAT
GCTTCAATTA GATATAATTT AAATGAAAGT GTTGGCTTCG TTGCTTTCGT CAATAACCTA
ACCGATAAAA GAGTTATTAA AAGTGGCAAC TCTAATTTCG GCCTTGGTTT TCACTCTGCA
AGTTATAATA AACCAAGAGA GTTTGGCCTA GCCGTTAAAT ACACTTTCTA A
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| Protein sequence | MNEKVKYNNY SNSIIVLSLL FNAPVFSEES DKKEKSQTLE VITVTAQKRV ESLQETPIAV
TAFTADGLEK MQVGNIAEIE NFTPNLVFDT SSPIGGSSTS AAVFIRGIGN TDFSLTTDPG
VGTYIDGVYV SRSIGGVLDL LDVERIEVLR GPQGTLFGRN SIGGAINITT RKPYDELAGR
LDLTLGSFNR TDVRGSIDIP FTDELLSTFA FSSKRRDGFV ERPLIGDELG NEDQLAFRGA
LYYEPNDEWN FQLSFDHSDI DEESAANVAV GFTPGAGTIG WALATYPTLS PDAAIVAGLK
DLDKYITKDD KDVSYGTYNN GSSATVDGAS FVANTHQDNF DLKYTAAYRR TKAAFHADAD
NTPFQITEIS NPDYYHKQIS HELQFLGTAM DDQIKYIAGV YYFDESGTDN VFVPLHLPTP
DLSAGFPAGL NNYADVENSS LAEYLQATWD INDTFSVTAG VRHTLDKKQF DYTQYLAADI
QGNPLPFFPG AVDETGTFRP GLSPLVGNGS GSISDNFEQT TFKLGVDAIL DDGTLLYYSF
SQGFKSGGFV LRYVESVAAP RTFEPETLDA HEIGIKWQSD NERIRVNGAV FYSDYQDAQV
TFFDKLGGPI TANAGEIDIK GVELEITALI TDDLILDIGY GYIDAAYNNI NPVEGLSLTL
DKSAKLVNTP ENSLHIGLDY SLYFDESDIA FRVDYAYTDD VFNDSQNSKF LFQEAHDMFN
ASIRYNLNES VGFVAFVNNL TDKRVIKSGN SNFGLGFHSA SYNKPREFGL AVKYTF
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