| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0129 |
|---|
| Symbol | |
|---|
| ID | 6114352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 156336 |
|---|
| End bp | 157049 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641631610 |
|---|
| Product | 3-methyladenine DNA glycosylase |
|---|
| Protein accession | YP_001758525 |
|---|
| Protein GI | 170724499 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2818] 3-methyladenine DNA glycosylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.310966 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTTTGAAT GTCAGTATAA AAATATGAGC CAGTTAGAAT CTTTTTCAAC TATTTATCAA
AGAGCAAGTG AGCGTAAGGG GGGAGATGAG AGCCTTGAAA GTTTGCTTAC TTCCAGTTTG
ACGCCAGATG AGATTGGTCA ATATAAAGAT GCTGAACTTC TCTCTGAGAT GAGTAAAAAG
GTATTCCAAT CAGGGTTTAT CTGGCGAATC GTTGAGAATA AATGGTCGGC GTATGAAGAG
GCTTTTTTTG GTTTTGAGCC ACACAAGGTA TTGATGTTAT CTCCTGAGCA GTTACAGGAG
CGGGCGAGCG ATCCTAATCT TATTCGTCAT ATGAAGAAGA CCATGGCTAT CTATGATAAT
GCCTTGATGA CCCATGATAT TGCCCGTGAG CACGGTAGTT TGGCTGAATA TATCGCTAAC
TGGCCAAGTG AAGAGATCAC ACAACTTTGG GCAGTGCTTA AACGCCGTGG TACTCGATTA
GGTGGCAATA CTGGCCCCTA TTTTCTGCGA GCGATAGGCA AAGATACTTT TTTGCTTACT
GGGGATGTGC AAGGCTACCT CACTTCTCAT AAGCTGGTTG ACTTTGGTTT TAGCTCCAAG
AGCGGTTTAA AACAGGTTCA GGGGGTCTTT AATACTTGGC AGCAGCAATC TGGTCGCAGT
TTAGCTGATA TCAGCCGAGT GCTTGCTTGC AGTGTCGGGG ACAATCGAAT TTAA
|
|---|
| Protein sequence | MFECQYKNMS QLESFSTIYQ RASERKGGDE SLESLLTSSL TPDEIGQYKD AELLSEMSKK
VFQSGFIWRI VENKWSAYEE AFFGFEPHKV LMLSPEQLQE RASDPNLIRH MKKTMAIYDN
ALMTHDIARE HGSLAEYIAN WPSEEITQLW AVLKRRGTRL GGNTGPYFLR AIGKDTFLLT
GDVQGYLTSH KLVDFGFSSK SGLKQVQGVF NTWQQQSGRS LADISRVLAC SVGDNRI
|
|---|
| |