| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0115 |
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| Symbol | |
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| ID | 6114338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 137584 |
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| End bp | 140055 |
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| Gene Length | 2472 bp |
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| Protein Length | 823 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641631596 |
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| Product | lysyl endopeptidase |
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| Protein accession | YP_001758511 |
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| Protein GI | 170724485 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.585546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATTA AAAATATCAA ATATTATATC GGCGCCGCCG GTATTTTTCT AAGTTTAGGT
GCTCAAGCGG CCCCACCTCT CTCTTTGAGT CAACCTGAAT TAGCAAAAAA TACAGAAATC
AAAGAGATGC CAGCGCAAGA TAATATGAAA TTAAGACAGC GTGATGAGGT TGAGCGGGCA
CTCAATACCG ACAGCTACCT GCTTAAGTTT GCTGAACCAA TTCAAGTCGC TATTACGCCT
GATAAGTGGC AATCGCAACT GGTGACCCAA GATGGTAAAA GCAGTGAAAT GTCTATTTGG
CGTACCAAAA TTGTCTCTAG CGATGCGCTA TCACTGAACT TTGGTTTCAG TGAGTTCTTT
ATGCCTGAAG GTGGTTCACT GCATATCTAT ACGCCAGATG GCTCGCAAAA GATCCGTCCC
TTTACTGCAA AAGATAATGA TGATCATGGT CAACTCTGGA CACCCATGTT GAGAGGGGAT
AGCGCGGTAA TCGAGGTCAA TATTCCAACC AAGCAGTTAA AGCAACTCAA ACTTAAGTTG
AGTGCGGTCA ACCATGGTTA TTTAGGGGCC AATATAAAAG ATATTTATGA CACTCTATCT
GGCTCCTGTA ATGTTGATGT AGTCTGTGGT GCTGGTGATG AGTGGCGTGA TCAGATACGT
TCAGCCGCGG CAATCAGTTT AGGTGGTTCA GGTTTCTGTT CTGGTGGTGC GTTGAACAAT
ACCGCCAATG ACGGACGTGG CTTCTTCCTG ACCGCTTTCC ATTGTGGCAT TAATGCTGGT
AACGCAGCTT CATTGGTAAC CTATTGGAAC TTTGAGAGTA GTTACTGTCG AGATCCAGGT
AGCGGTGATA GCGGTGGCCC GGGTGATGGA ACCTTAGATC AGTTCAATAC TGGTGCGATC
TTTAGGGCTG GTTACTCTCC ATCTGATATG ACACTGGTTG AGCTTGATGA TCCTTTCGAC
CCTGGTCACA ACGTCTTTCT TGCGGGTTGG AACGCTGCCG ATGAGACCTC CACATCTGCG
GTTGCTATTC ACCACCCTAG CGTAGATGAA AAGCGTATCA GTTTTGAAAA TGACGCAACC
ACAATTACCT CATACGGTAG TAATCCCACT CCAGGAGACG GTACTCATAT TAGGGTTATC
GACTGGGATC TGGGTACAAC CGAAGGTGGC TCCTCGGGCT CACATCTATT TGATCAGAAT
AAGCGAGTAA TTGGTCAGCT CCATGGTGGT GGTGCTGCAT GTGGTAATGA TCTGTCAGAT
TGGTATGGAC GCATACATAC CTCATGGGAT GGTGGCGGTA CTGCTAGCAC CCGATTGAGT
ACTTGGCTTG ACCCTGAAAA CACTGGCCAA ATAGCCATAG ACGGAATGAA TGCAACCGAT
CCAGGTGACA ATCAACTTCC TGTGGCTAAC ATGAATGGCC CATATCTAGG ATTTGTTGAT
ACGACTGTAG ACTTCAGTAG TGCAGGCTCT GAAGATCCAG ATGGAACGAT TGTAAGCTTC
CTTTGGGATT TCGGTGATGG TAGTGATACC AGCGAGCTTG AGAACCCATC CCATGTTTAT
ACGGCCCGTG GTAACTTTGA GGTATCACTT AAAGTAACCG ATGATGAGGG CGCGTCGAGA
ACGGCTTACA CTCAGGCAGC TATCTTCGAC CAAGGTGAGG ATGAGCTGGT TAATGAGGTA
CCGAGAACCG ATCTTGCAGC GGGTACTGGT GAAGCCATCT ACTTCTATAT GCAGGTGCCT
GCAGGTGCGA CGGATCTGGA GTTCATTACC GAGGGGTCAA ACGGTGATGC AGATCTTTAT
GCTAAACAAG GTACTCTGCC GACGTTAAGT GACTACGATT GTCGCTCCTA CTCATCAAGT
AGCAATGAAA CCTGTAGCTT CCCTACACCG ACATCAGGTG TGTGGTATGT GATGGTTAAT
GCTTACTCTA CTTATGATGG GCTGACATTG ACCGGATCCT ATAGCGCCGA TCAGACTAAC
CTGCCACCAG TTGCCAGTTT CGATGCCAGC TTTACTGATG GTGAAGGCAC CTTTACCAGT
ACCAGTACAG ATGCCGATGG TAGCATTGTA ACTTGGGCTT GGGACTTTGG TGATGGCAGT
ACTGGAAGTG GTGAGAGTAC AACTCACAAC TACAATAGCT CTGGTAACTA TACTGTTTCG
CTGACTGTTA CTGATGATGA CGGTGCTCAA CACGCTGTGA GTCAGAGTTA TGATGTGACT
ATTCCTGTTA GTGATATCGA GGCTTCTGTT ATCCGTGCGC TTAAGTCACG CCGCGGCAGT
GTGATGGTTG ATCTCAGATG GGATGGCGCG ATCGGAAACA CTGTCAGCAT CTACCGTGAT
GGTGAGATGG TGGCTGAGAC GAGTAATGAT GGTCGTTTCC GTGACCGTTT CAGAACTACC
ACAGCTGATA GCGCTGAGTA TAAGATCTGT GACTCCTCTG GATGCTCTAA CACCTTTACT
GCAAGTTTCT AG
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| Protein sequence | MDIKNIKYYI GAAGIFLSLG AQAAPPLSLS QPELAKNTEI KEMPAQDNMK LRQRDEVERA
LNTDSYLLKF AEPIQVAITP DKWQSQLVTQ DGKSSEMSIW RTKIVSSDAL SLNFGFSEFF
MPEGGSLHIY TPDGSQKIRP FTAKDNDDHG QLWTPMLRGD SAVIEVNIPT KQLKQLKLKL
SAVNHGYLGA NIKDIYDTLS GSCNVDVVCG AGDEWRDQIR SAAAISLGGS GFCSGGALNN
TANDGRGFFL TAFHCGINAG NAASLVTYWN FESSYCRDPG SGDSGGPGDG TLDQFNTGAI
FRAGYSPSDM TLVELDDPFD PGHNVFLAGW NAADETSTSA VAIHHPSVDE KRISFENDAT
TITSYGSNPT PGDGTHIRVI DWDLGTTEGG SSGSHLFDQN KRVIGQLHGG GAACGNDLSD
WYGRIHTSWD GGGTASTRLS TWLDPENTGQ IAIDGMNATD PGDNQLPVAN MNGPYLGFVD
TTVDFSSAGS EDPDGTIVSF LWDFGDGSDT SELENPSHVY TARGNFEVSL KVTDDEGASR
TAYTQAAIFD QGEDELVNEV PRTDLAAGTG EAIYFYMQVP AGATDLEFIT EGSNGDADLY
AKQGTLPTLS DYDCRSYSSS SNETCSFPTP TSGVWYVMVN AYSTYDGLTL TGSYSADQTN
LPPVASFDAS FTDGEGTFTS TSTDADGSIV TWAWDFGDGS TGSGESTTHN YNSSGNYTVS
LTVTDDDGAQ HAVSQSYDVT IPVSDIEASV IRALKSRRGS VMVDLRWDGA IGNTVSIYRD
GEMVAETSND GRFRDRFRTT TADSAEYKIC DSSGCSNTFT ASF
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