| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0015 |
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| Symbol | |
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| ID | 6114232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 19710 |
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| End bp | 22919 |
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| Gene Length | 3210 bp |
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| Protein Length | 1069 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641631490 |
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| Product | amidohydrolase |
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| Protein accession | YP_001758411 |
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| Protein GI | 170724385 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000661642 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTAAAAC ATAAATTAAC GCCGCTATGC GCCGCGATAG CACTCAGCTT CAGCTCTCCC
TCTTTTGCCG AAGAACCTAG TGATAAAAAA GAGGCCAAAT GGCAGGTCAA TGCACCAGCC
AATGCACCAT TAGAGAAAGT CGATATCAAT GTAACCGAAG GCACTTGGAT GAACGTCAGT
GTCAGCCCTG ACGGTAAAAA TATCGTATTC GACATGCTAG GTGATATCTA CCAGATGCCT
ATAGAGGGTG GCGAAGCCAA AGTGCTCGCT GAAGGTATCG CTTGGCAGAT GCAGCCAGTA
TATAGCCCAG ACGGTAAATA TATCGCTTTC ACCTCAGATG AAGATGGTGG CGATAATATC
TGGATAATGG AAGCAGATGG TAGCAAGCCT AGAGCGGTAA CAGAGGAAAC ATTTAGGCTG
CTCAATAGCC CAGCCTGGAG CCCTGACTCT CAATACCTAG TTGCCCGTAA ACACTACACA
GGTTCACGTA GCTTAGGCGC TGGTGAAGTT TGGATGTACC ATGTTGCTGG TGGTGAAGGC
GTCAAACTGA CAGAGCGACC TAATGAACAG AAAGATCTAG GTGAACCCGC CTACTCTCCA
GACGGCCGTT ATATCTACTT CAGCCAAGAT GCGACCCCAG GAAAAACCTT CCACTACTCA
AAAGATTCGG TCAAAGGGAT CTACAAGATA AAGCGTTATG ATACTCAAAC CGGTGATATT
GAGGTATTAA TCGAAGGAAC TGGTGGTGCC ATTCGCCCAA CACCAAGTCC TGATGGTACT
AAACTCGCCT ATATCAAACG CGATGGATTT CAGTCATCTT TATACCTGCT AGATCTTAAG
TCAGGTAAAA TCGATAAGCT TTACGGTAAA CTCGACAGAG ATATGCAGGA GACTTGGGCT
ATTCATGGTG TCTACCCAAG CATGAGTTGG ACCAGTGACA ACGAAGAGAT TGTCTTCTGG
GCTGGCGGCA AGATCAATAA GCTAGATGTT GAATCAAAGT CAGTTAAGCA GATCCCCTTC
TCGATTAAGA CTAAACTCGA TGTGCAACCT GCAGTGCGCT TCACTCAAAA CTTAGATCAA
GATAAGTTCG ATGTGAAGAT GCTACGAATG GCGCAGGTAT CACCAGATGG TAAAAAAGTC
GTCTATGAAG CATTGGGTAA ACTTTGGGTC AAATCCCTCT CTAATGGCAA GCGAACACGA
CTAACTAAAC TCGATTCCGA ACTAAGAGAA CTATTTCCTC AATGGTCACG TGACGGGAAA
AGCATTGTCT TTTCAACATG GGATGATGAA GAGCAAGGTA GTATTCGTAT CGTTAATGTC
AGAAACAAGC GGGTTAAAAC CTTAACCAAA GAGCCTGGCA AATATGTAGA GCCCACCTTC
TCTCCTGACG GTTCATTCGT GGTTTATCGC AAGGCTAAAG GCGGTTATAT CACTCCGAGA
ACTTGGTCTC AAGAAACCGG ACTTTACCGC GTCGATATCA AAGGTAAAGA GAGTATTAAG
ATCACTCCTG ACGGCTATCA ACCGCAATTT GGTGCTGACT CAGATCGTGT CTACTTTATG
GATCACGGTG AAACACCAGA ACTTGCTTCC ATCAACCTAA ACGGTTTTCA AAAACGTGTT
CACTATACCA GTAAGCATGC CACAGAGTTT CGTGTCTCTC CCGATGGAAA GCAATTAGCC
TTCGCTGAGC GCTTTAAAGT TTTTGTCACC CCTTTTGCTA AGCATGGTGA GACCATCAAT
ATCGGTCCTA AAGCCAATAA CCTTCCAGTA ACTCAACTCA GCGTTCGTGC TGGTGAGAGT
ATTAGCTGGA ACAATGATAG TGACCAACTT TACTGGACTT TAGGCCCCGA ACTTTACCAA
GTGGCAGTCG ACAACTCCTA TGGAACGGAT ACCACTGCTT CTAATAGTAA AGCAGATAAA
GCAACAGAGC CAAAAATTAC CGATCTTGGA TTTACCCAAA AAGCAGATGT TCCACGTGGA
ACAGTTGCAT TTGTCGGTGG CAATATCATC ACAATGGAAG ATGATAAAGT AATAGAAAAT
GGCGTCGTAA TAGTCAAAGA TAACCATATT GTCAGCGTTG GTGATGCCAG TATAGAGATA
CCAAGTGATG CTCAGGTGAT CGACATTAAA GGTAAGAGTT TGATGCCGGG TCTATTTGAT
GCTCACGCTC ATGGCTCACA GGGCGAAAAT GAGATTATCC CGCAGCAAAA TTGGGAGCTC
TACGCAAATC TTGCACTGGG TGTCACTACC ATTCATGATC CATCCAATGA CACAACCGAG
ATCTTTGCCG CATCTGAACA GCAGAAAGCA GGTAATATTG CTGGCCCTCG TATCTTCTCA
ACCGGTACCA TTTTATATGG TGCAAATGCA CCGGGTTATA CCTCACACAT AGACTCACTC
GACGATGCTA AATTCCATCT AGAACGTCTT AAGAAAGTCG GTGCTTTCAG CGTTAAGAGC
TACAACCAAC CAAGACGTAA CCAAAGACAA CAAGTGATAG CAGCTGCCCG TGAACTTGAG
ATGATGGTGG TTCCAGAAGG CGGAAGCTTA CTGCAACATA ACCTGACGAT GATTACTGAC
GGTCATACAG GTATCGAGCA TTCACTTCCA GCTGGTGCCA TCTACAATGA CATTAAGCAG
TTCTGGAGTC AGACTGAAGT GGGTTACACC CCTACTCTGG TAGTTGCTTA CGGCGGTATC
TCGGGTGAGA ACTACTGGTA TGATAAAACA GATGTTTGGT CTCATCCTCG TCTCTCTCAA
TATGTGCCAG GGGATCTACT ACAAGCGCGT TCTATGCGTC GACCAACGGC ACCAGATGAA
CATTACAACC ATTTCAATGT GGCACGAGTT GCCAATGAGA TGAACGATTT AGGCATTAAG
CCAAATATCG GTGCCCATGG TCAGCGTGAA GGTCTGGCTG CTCATTGGGA GATGTGGATG
TTTGCTCAAG GTGGAATGAG TAATCTCGAA GTGCTCAAAA CTGCCACGAT CAATCCTGCA
AAACATTTTG CAATGGATCA TCAAATTGGC TCGATCAAAC AGGGGAAACT TGCTGACCTG
ATAGTTATTG ACGGTAATCC GCTGGAAGAT ATTCGAGTCA CAGACAGAGT CACCCACACT
ATGGTCAATG GCAAACTTTA TAATGCCGAG ACCATGGATC AATTAAATGG AGAGGAAGAT
AAGCGAAAGC CATTCTTTTT TGAACTTTAA
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| Protein sequence | MLKHKLTPLC AAIALSFSSP SFAEEPSDKK EAKWQVNAPA NAPLEKVDIN VTEGTWMNVS
VSPDGKNIVF DMLGDIYQMP IEGGEAKVLA EGIAWQMQPV YSPDGKYIAF TSDEDGGDNI
WIMEADGSKP RAVTEETFRL LNSPAWSPDS QYLVARKHYT GSRSLGAGEV WMYHVAGGEG
VKLTERPNEQ KDLGEPAYSP DGRYIYFSQD ATPGKTFHYS KDSVKGIYKI KRYDTQTGDI
EVLIEGTGGA IRPTPSPDGT KLAYIKRDGF QSSLYLLDLK SGKIDKLYGK LDRDMQETWA
IHGVYPSMSW TSDNEEIVFW AGGKINKLDV ESKSVKQIPF SIKTKLDVQP AVRFTQNLDQ
DKFDVKMLRM AQVSPDGKKV VYEALGKLWV KSLSNGKRTR LTKLDSELRE LFPQWSRDGK
SIVFSTWDDE EQGSIRIVNV RNKRVKTLTK EPGKYVEPTF SPDGSFVVYR KAKGGYITPR
TWSQETGLYR VDIKGKESIK ITPDGYQPQF GADSDRVYFM DHGETPELAS INLNGFQKRV
HYTSKHATEF RVSPDGKQLA FAERFKVFVT PFAKHGETIN IGPKANNLPV TQLSVRAGES
ISWNNDSDQL YWTLGPELYQ VAVDNSYGTD TTASNSKADK ATEPKITDLG FTQKADVPRG
TVAFVGGNII TMEDDKVIEN GVVIVKDNHI VSVGDASIEI PSDAQVIDIK GKSLMPGLFD
AHAHGSQGEN EIIPQQNWEL YANLALGVTT IHDPSNDTTE IFAASEQQKA GNIAGPRIFS
TGTILYGANA PGYTSHIDSL DDAKFHLERL KKVGAFSVKS YNQPRRNQRQ QVIAAARELE
MMVVPEGGSL LQHNLTMITD GHTGIEHSLP AGAIYNDIKQ FWSQTEVGYT PTLVVAYGGI
SGENYWYDKT DVWSHPRLSQ YVPGDLLQAR SMRRPTAPDE HYNHFNVARV ANEMNDLGIK
PNIGAHGQRE GLAAHWEMWM FAQGGMSNLE VLKTATINPA KHFAMDHQIG SIKQGKLADL
IVIDGNPLED IRVTDRVTHT MVNGKLYNAE TMDQLNGEED KRKPFFFEL
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