| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_5540 |
|---|
| Symbol | |
|---|
| ID | 6141614 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | + |
|---|
| Start bp | 5858996 |
|---|
| End bp | 5860609 |
|---|
| Gene Length | 1614 bp |
|---|
| Protein Length | 537 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641631241 |
|---|
| Product | peptide chain release factor 3 |
|---|
| Protein accession | YP_001758168 |
|---|
| Protein GI | 170751908 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG4108] Peptide chain release factor RF-3 |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.073692 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0734795 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGATGC AGACCAAGAC CGAGGCGAGG CCGGCCGATC CGGTGTCGCG GCGGCGCACC
TTCGCGATCA TCTCCCACCC CGACGCGGGC AAGACCACGC TCACCGAGAA GCTGCTGCTG
TTCGGGGGCG CGATCCAGCT CGCCGGCGAG GTGAAGGCCA AGCGCAACAG GGTCTCGACC
CGCTCCGATT GGATGGGCAT CGAGAAGGAG CGCGGCATCT CGGTGGTCAC CTCGGTGATG
ACCTTCGAGT ACGGCGACTG CGTCTTCAAC CTGCTCGACA CGCCCGGCCA CGAGGACTTC
TCGGAGGATA CCTACCGGAC GCTCACGGCG GTCGATTCGG CCGTGATGGT GATCGACGCC
GCGAAGGGCA TCGAGGCGCG CACGCGGAAA CTGTTCGAGG TCTGCCGCCT GCGCGACATC
CCGATCGTCA CCTTCATCAA CAAGCTCGAC CGCGAGGCCC GCGACCCGTT CGAGCTGCTC
GACGAGATCG AGAAGACGCT GGCGCTCGAC GTCGCCCCGG TCACGTGGCC GATCGGCACG
GGCCGCAACT TCTCCGGGAC CTACGAGCTC GGCGGCAACC GCGTGCGCCG GCTCGACGCC
GCCGAGGATG CCGGGATGGT GGCGGTGTCC GGCCCGGACG ACCCGCTGTT CGACGAGCTG
CTGACCGAGA ACGGCGCGGC CGACGCGTGG CGCGAGGAGG TCGAGCTTGC TGAGGGCGGG
CTGAAGCCGT TCGACCTCGA CGCGTTCCGC GAGGGCCACC TGACGCCGGT CTTCTTCGGC
TCGGCGCTGC GCAATTTCGG CGTGCGCGAC CTGATCGACG GTCTCGCCAA GGTTGCGCCG
CCGCCCCGCG GCCAGGACGC GGACAAGCGG CTCGTCGAGC CGACCGAGCC GCGCATGACC
GGCTTCGTGT TCAAGATCCA GGCGAACATG GACCCGAACC ACCGGGACCG CATCGCCTTC
ATGCGGGTCT GCTCGGGCAA GCTCAACCGG GGCATGAAGG CCCGGCTGGT GCGCACCGGC
AAGCCGATCT CGCTGTCGGC GCCGCAGTTC TTCTTCGCGC AGGACAGGGC CATCGCCGAC
GAGGCCTATG CCGGCGACGT GGTCGGCATC CCGAACCACG GTACCTTGCG CATCGGCGAC
ACGCTCACCG AGGGCGAGGA CATCGTGTTC CGCGGCGTGC CGAGCTTCGC GCCGGAGATC
CTGCGCCGGA TCAAGCTCAC CGACGCCATG AAGGCGAAGA AGCTGCGCGA GGCGCTCCAG
CAGATGGGCG AGGAGGGCGT CGTCCAGGTC TTCGTGCCGC AGGACGGCAG CCAGGCGATC
GTCGGCGTGG TCGGCGCTCT GCAGCTCGAC GTGCTGAAGG AGCGCCTCCA GGCCGAGTAC
GGCCTGCCGG TCGATTACGA GACCTCGCGC TTCTCGGTCT GCCGCTGGGT GTCGTCCGAT
TCGGAGGCCG AGCTCGACAA GTTCATCGAC TCGCACGGCT CGGCCATGGC CAAGGACCTC
GACGGCGCCC CGGTCTTCAT GGCGACCACG GCCTTCTCGC TCCGCTACGA GGAGGAGCGC
TACCCGGCCG TGCGCTTCAC CGACGTGAAG GATTACCAGA AGCGGGCGGG GTGA
|
|---|
| Protein sequence | MLMQTKTEAR PADPVSRRRT FAIISHPDAG KTTLTEKLLL FGGAIQLAGE VKAKRNRVST
RSDWMGIEKE RGISVVTSVM TFEYGDCVFN LLDTPGHEDF SEDTYRTLTA VDSAVMVIDA
AKGIEARTRK LFEVCRLRDI PIVTFINKLD REARDPFELL DEIEKTLALD VAPVTWPIGT
GRNFSGTYEL GGNRVRRLDA AEDAGMVAVS GPDDPLFDEL LTENGAADAW REEVELAEGG
LKPFDLDAFR EGHLTPVFFG SALRNFGVRD LIDGLAKVAP PPRGQDADKR LVEPTEPRMT
GFVFKIQANM DPNHRDRIAF MRVCSGKLNR GMKARLVRTG KPISLSAPQF FFAQDRAIAD
EAYAGDVVGI PNHGTLRIGD TLTEGEDIVF RGVPSFAPEI LRRIKLTDAM KAKKLREALQ
QMGEEGVVQV FVPQDGSQAI VGVVGALQLD VLKERLQAEY GLPVDYETSR FSVCRWVSSD
SEAELDKFID SHGSAMAKDL DGAPVFMATT AFSLRYEEER YPAVRFTDVK DYQKRAG
|
|---|
| |