Gene Mrad2831_5331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_5331 
Symbol 
ID6141403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp5641403 
End bp5642104 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content76% 
IMG OID641631032 
Producthaloacid dehalogenase, type II 
Protein accessionYP_001757961 
Protein GI170751701 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.416578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGTCC GGGCGCTGGT CTTCGACGTC TTCGGGACGC TGGTCGACTG GCGCTCCGGC 
GTCGCCCGCG AGGCGGCGCG GCTGCTCGCG CCCGTCGCGC CGGACCTCGA TGCCGGCGCT
TTCGCGGACG CGTGGCGGGC ACAGTACAAT CCCTCGATGG AGACGGTGCG CTCCGGCGCC
CGGCCCTACG TCGACCTCGA CACGCTCCAG GCCGAGTCGC TGCCCGGCGT GCTGGCGCAG
TTCGGCATCG CGGGCGTCTC CGAGGCCGTG CAGCGGGAGC TGGTCCAGGC CTGGCACCGG
CTCGACGCGT GGCCCGAGGT GCCGGACGCG CTGCGGCGGC TGCGCGAGAA GCACCTCCTG
GCGCCGGTCT CCAACGGGCC TGTCCGGCTG ATGGCCGACC TCGCCCGCCG CAACGGCCTG
GTCTTCGACG CGGTGCTCGG CGCCGGCTAC TCCCGCGACT ACAAGCCGAA GCCGGCGCTC
TACCGCGACG CCGTCGCGGC CTTCGGCTTC GCGCCGGGGG AGACCATGAT GGTCGCGGCA
CACTCGAACG ACCTCGCGGC GGCGGCGGGC CACGGGCTCG CCACCGCCCA CATCGCCCGC
CCGCACGAGC ACGGCCCGGC CGGCGGCGAG GCCGCGCCGA CGGTGCCGGT CACCCACGCG
GCGCGGGACT TGGCGGATCT CGCCGACCGG CTCGGCTGCT GA
 
Protein sequence
MTVRALVFDV FGTLVDWRSG VAREAARLLA PVAPDLDAGA FADAWRAQYN PSMETVRSGA 
RPYVDLDTLQ AESLPGVLAQ FGIAGVSEAV QRELVQAWHR LDAWPEVPDA LRRLREKHLL
APVSNGPVRL MADLARRNGL VFDAVLGAGY SRDYKPKPAL YRDAVAAFGF APGETMMVAA
HSNDLAAAAG HGLATAHIAR PHEHGPAGGE AAPTVPVTHA ARDLADLADR LGC