Gene Mrad2831_5245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_5245 
Symbol 
ID6141316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp5567586 
End bp5568587 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content65% 
IMG OID641630951 
Productsecretion protein HlyD family protein 
Protein accessionYP_001757881 
Protein GI170751621 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCCTAC TGCTGCTCGC CGGCGGCGGC CTGTACTACT GGCTCTCGAC GCGCGGGAAG 
ATTAGCACCG ACGATGCCTA CACCGACGGG AATATCGTCA ACGTCGCCCC GCAGGTCGCC
GGACAGGTCA TCGCCCTGGA TGTCACGGAC AACCAGTTCG TCCGCAAGGG CGATCCGCTC
TTCCGCATTG ACCCGCGGCA GTTCAGGTTC AGCCGCGAGC AGGCCCAGGG CCAACTCGAC
GCCAGCAACG CGCAGGTCGC CAACCAGAAG CTCGGCGTCG AGATCGCCAG GAAGAACTTT
CCCGCCGCGC TCCAGCTCGC ACAGGCCAAC CTCGACTCGG CCAAGGCCAA CCTCGCCCTG
CAGCAGGCGA ACTACGACCG TCAGAGGAGC CTGCCGAAGC TCGCCACGAC TCAGCAGGAC
GTCGACACTA CCGCGGCGAA CTACCAGCAG GCTAAGGCAC AGGTCGAGCA GGCGCAGGCG
CGCCTCGTCC AGGCCATGCC GGTTCAGCAG AACATCGGTC AGTCCGAGCA GCAGGTCGAC
CAGCTTAAGG GCCAGGCCGA ACAGGCCAAG GCGCAAGTCG AGCAGGCTGA CCTGAACATT
GAGTGGAGCG TGGTGCGCGC GTCTCAGGAC GGCTGGGTCA CGAAGCGCAA CGTCAACGCC
GGCGACTACC TGTCAGCCGG CCAGCAAGTG ATGTCGCTCG TCACCACCGA CGTCTGGGTG
ACGGCCAACT ACAAGGAGAC TGAACTCGAC GGCATGCGCC CCGGGCAACG GGTCAAGATT
GCCATCGACG CCTACCCCGA CCTCGATCTG GAGGGCCACG TGGATTCGAT CCAGCGCGGC
TCCGGCTCTA AGTTTTCCGC CTTCCCGGCC GAGAACGCCA CCGGCAACTT CATCAAGATC
GTTCAGCGCG TGCCGGTGAA GATCGTCATC GACGGCGGTC TGAAGAAGGA CGAGCCGCTG
CCGCTCGGCA TCAGCGTCGT ACCGACGGTG ATGCTCAAAT GA
 
Protein sequence
MVLLLLAGGG LYYWLSTRGK ISTDDAYTDG NIVNVAPQVA GQVIALDVTD NQFVRKGDPL 
FRIDPRQFRF SREQAQGQLD ASNAQVANQK LGVEIARKNF PAALQLAQAN LDSAKANLAL
QQANYDRQRS LPKLATTQQD VDTTAANYQQ AKAQVEQAQA RLVQAMPVQQ NIGQSEQQVD
QLKGQAEQAK AQVEQADLNI EWSVVRASQD GWVTKRNVNA GDYLSAGQQV MSLVTTDVWV
TANYKETELD GMRPGQRVKI AIDAYPDLDL EGHVDSIQRG SGSKFSAFPA ENATGNFIKI
VQRVPVKIVI DGGLKKDEPL PLGISVVPTV MLK