| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_5162 |
|---|
| Symbol | |
|---|
| ID | 6141232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | + |
|---|
| Start bp | 5490863 |
|---|
| End bp | 5491453 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | 641630871 |
|---|
| Product | sortase family protein |
|---|
| Protein accession | YP_001757802 |
|---|
| Protein GI | 170751542 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
|---|
| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCC GTCCGGGGAC CGGACTGGGG AGGGCCCTCG CGGCCCTCCT CACCCTCGCG
GGAATCGGGC TGGCGGCGCA GGCCGCCTGG ATCCCCGCCA GGGCCGCCCT GGCGCAGGTC
CTGCTGGAGC GCGCCTTCGC CCGCAGCCTG GCCGAGGGTC GGCCCGCCCG GCCCTGGCCC
TGGGCGGACA CCGAGCCGGT CGCCCGGCTC ACCGTCGCGG GCCGCGGCTT CGTGGTGCTG
AGGGGCGGGA GCGGGCAGGC CCTGGCCTTC GGCCCCGGCC ATCTGGACGG CACCCCGGAG
GCCGGCGCGC CCGGCACCGC GGTCATCGCC GCCCACCGCG ACACGCAGTT CGCGGTGCTG
GGGCAGCTCA GGCCCGGCGA TCCGGTCACG GTGACGGGCC GCGACGGCCG GACCCTGCGC
TTCCGAGTCA CCGGCACGCG GGTGGCGCGC TGGGACGCCT CGGGCATCGA CCCGCAGGCC
CCCGGCCGGC ACCTCGACCT CGTCACCTGC TGGCCCCTGG AGGCGCTGCG GGCCGGCCCG
CTGCGGCTGA TCGTCGAGAG CGAGCTGGCC TCGGAGGCGG GGCGCTCCTG A
|
|---|
| Protein sequence | MSRRPGTGLG RALAALLTLA GIGLAAQAAW IPARAALAQV LLERAFARSL AEGRPARPWP
WADTEPVARL TVAGRGFVVL RGGSGQALAF GPGHLDGTPE AGAPGTAVIA AHRDTQFAVL
GQLRPGDPVT VTGRDGRTLR FRVTGTRVAR WDASGIDPQA PGRHLDLVTC WPLEALRAGP
LRLIVESELA SEAGRS
|
|---|
| |