Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_5161 |
Symbol | |
ID | 6141231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010505 |
Strand | + |
Start bp | 5488677 |
End bp | 5490866 |
Gene Length | 2190 bp |
Protein Length | 729 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 641630870 |
Product | vault protein inter-alpha-trypsin subunit |
Protein accession | YP_001757801 |
Protein GI | 170751541 |
COG category | [R] General function prediction only |
COG ID | [COG2425] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.997936 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGTTCT TCGCTCCACG ATCCGCGCTC GAGCCCCCCC GCAACGCCGC GCTGTCACCC CTCTTCCTCG CGCTGCTGGC GCTCCTCGTC ATGCTCGCCT CGGCCCACGC GGCGCCGGGG CCGGCACGGG GCGGCCTCAC GCTGCGCGGG CCGTCCGGCA CCGCGCCGGT CGAGGCCGTC CAGCTCGCGA CCGACATCAG CGTCGACGTC AGCGGCCCGA CCGCCCGGGC CACCGTCACC CAGGCCTTCC GCAACGTCAC GGCGGAGTGG GTCGAGGGCA CCTACCTGTA CCCCCTGCCG GAGGACGCGG CCGTCGACAG GATGAAGCTC GTCGTCGGCT CCCGCGTGAT CATCGCCGAC ATCCGCGAGC GGGCGGCGGC CAAGCGCGCC TACGAGGCCG CGAAGGCGGC CGGGCAAGCG GCGGCGCTCA CCGCGCAGGA GCGGCCCAAC GTGTTCACCA ACGCGGTCGC CAATATCGGC CCCGGCGAGA CGGTGCTGGT CCAGATCACC TATCAGCAGA CGATCCCCGT CTCCGGCGAG ACGCGGACGC TGCGCCTGCC CCTGGTCGTC GCGCCCCGCT ACAATCCCGC CCCCACCTCG GTGGACGCGG TCTCCCTCGA CGGCCCGGCC GCGGCGGCCC GCGACCCGGT TCCGGATCGC GCCCGGATCA GCCCGCCGGT GCTCGACCCG GCCCTGTCCG CGCCGACCAA CCCGGTCGCC GTCACCGTGC GGCTCCGGGC GGGCTTCGCC GTCGGCGCCG TTCAGAGCGC GACCCACGCG ATCCGCGTGA TCGAGACCGG CCCGGAGGCG CGGACCGTCA CGCTCGCCGA GGGCGTCGTG CCGGCCGACC GCGATCTCGA GCTGACCTGG GCGCCGGTCC CGAGCCGGAT GCCCGGACTC GGCCTGTTCC GCGAGACCGT GGCCGGCCGG ACCTATCTGC TGGCCGCCGT GAGCCCGCCG GCGATCGAGG CCGACGCGGC CGCCCGGCCG GCGCGCGACG TCACCTTCGT CATCGACAAT TCCGGCTCGA TGTCGGGCGC CTCGATGCGG CAGGCCAAGG CCGGGCTGCT GGCCGGCCTC GGCCGCCTGA GCCCGCGGGA CCGCTTCAAC GTCATCCGCT TCGACGACAC CTGGGACGCG CTGCATCCCG AGCCGGTCCC GGCGACGCGG GCGGCCCTGG CCGAGGCTGA AGCCTTCGTC GCCGCCCTGG AGGCGCGCGG CGGCACCGAG ATGCTGGCGC CGCTCAAGGC GGCGCTCGCC GACCCGCACC CGGAGGACGG GCGCGTCCGC CAGGTCGTGT TCCTCACCGA CGGCGCCGTC GGCGACGAGG AGCGGATCTT CGCGGCGATC CACGCGGATC TCGGGCGCAC GCGGCTGTTC ATGGTCGGCA TCGGCTCGGC GCCGAACGGC CACCTGATGC GCCACGCCGC CGAGATCGGC CGCGGCAGCT TCACCGAGAT CCGCGACCTC GCGCAGGTCG GCGAGCGGAC CCGGGCACTG TACGAGAAGC TGGAATCGCC CGCCGTCACC GACCTGACCG CGACCTTCTC GGTCCCGGGC GTCGCGGTCA CGCCGGGCGC GCTGCCCGAC CTGTACCGCG GCGAGCCGCT GGTCTTCGCC GCGCAGCTGC CGGGATCGGC CGAGGAAGCG GCCCGCGGGA CCGTGACCGT CTCGGGCCGG GTGGGCGGCC GGACCTGGAC CCGGACGCTG CCGCTCTCCG GAGCGGGTGA GGGCGCCGGC ATCTCCAAGG TCTGGGCGCG TTCCCGGATC GGCGAGACCG AGACGGCGCG CATCACCGGG CGGCTCGGCG CGGACGCGGC CGACGCCACC ATCCTGGCGC TGGCCCTGGA GCACGGCCTG ACGACGCGGC TGACCAGCCT CGTGGCCATC GACGCGACCC CGCGCCGCGC GCCGGGCACG GCCCTCGTCG CCGCCGACCT GCCGCTGAAC CTGCCGGCGG GCTGGGACTT CGCCAAGGTG TTCGGCACGG ACCGGCCCGG CGCCGCGCCC GCCGACGACG GGGCGGCCCG GATCGTGCCG ATCCGCGCCG ACGGCGGGGC GGTCGACCTG CCGCAGACCG GGGCCGGGAT CGTGGCGAAG CTCGGCCTGG GCCTGCTCCT CGCCCTGTTG GGCCTCCTGC TGCGCACCGG CCCGACGATC GGCGGCCGGC GGACCGGGAA CGCGCGATGA
|
Protein sequence | MPFFAPRSAL EPPRNAALSP LFLALLALLV MLASAHAAPG PARGGLTLRG PSGTAPVEAV QLATDISVDV SGPTARATVT QAFRNVTAEW VEGTYLYPLP EDAAVDRMKL VVGSRVIIAD IRERAAAKRA YEAAKAAGQA AALTAQERPN VFTNAVANIG PGETVLVQIT YQQTIPVSGE TRTLRLPLVV APRYNPAPTS VDAVSLDGPA AAARDPVPDR ARISPPVLDP ALSAPTNPVA VTVRLRAGFA VGAVQSATHA IRVIETGPEA RTVTLAEGVV PADRDLELTW APVPSRMPGL GLFRETVAGR TYLLAAVSPP AIEADAAARP ARDVTFVIDN SGSMSGASMR QAKAGLLAGL GRLSPRDRFN VIRFDDTWDA LHPEPVPATR AALAEAEAFV AALEARGGTE MLAPLKAALA DPHPEDGRVR QVVFLTDGAV GDEERIFAAI HADLGRTRLF MVGIGSAPNG HLMRHAAEIG RGSFTEIRDL AQVGERTRAL YEKLESPAVT DLTATFSVPG VAVTPGALPD LYRGEPLVFA AQLPGSAEEA ARGTVTVSGR VGGRTWTRTL PLSGAGEGAG ISKVWARSRI GETETARITG RLGADAADAT ILALALEHGL TTRLTSLVAI DATPRRAPGT ALVAADLPLN LPAGWDFAKV FGTDRPGAAP ADDGAARIVP IRADGGAVDL PQTGAGIVAK LGLGLLLALL GLLLRTGPTI GGRRTGNAR
|
| |