Gene Mrad2831_3973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_3973 
Symbol 
ID6140028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp4224821 
End bp4225552 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content76% 
IMG OID641629684 
ProductHAD family hydrolase 
Protein accessionYP_001756630 
Protein GI170750370 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00896936 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCGGA TGCCGGCCCG GATGCCGGCC GCGCCCGGGC CGGGTCTCGT CGTCCTCGAC 
TTCGACGGCA CGCTGGCCGA CAGCTTCGCG TGGTTCTGCT CGGTGCTGAA CGGCGTCGCC
GACCGCTACC GGTTCCGGCG GGTCGAGGCC CACGAGGTGG AGGAGCTCCG GCTCCAGGGC
GCCCGGGCGA TCGTCGCCCA TCTCGGCATC CCGCGCTGGA AGCTGCCGCT CATCGCCCGC
CACATGCACG CGCTGGCCGC GCGCGACGCC GCGCAGATCG CCCTGTTTCC CGGCGTCCCG
GCGATGCTGG ACGCGGTCGC GGAGGCGGGC GTGCCGCTGG CGATCCTGTC GTCGAATCGC
GCCGACACGG TGCGGCGGGT GCTCGGGCCG GACAGTGCCG CCCGCATCGG CACCTACGCC
TGCGGGGCGT CGATCTTCGG GAAGGCGCGC CGGCTGCGGG CGCTGCTCGC GCGGACCGGC
GTGCCGCCGC ACCGGGCCCT CTGCATCGGC GACGAGATCC GCGACCTCGA GGCGGCGCGC
GCCCTCGGCT GCCCGTTCGG GGCCGTGGCC TGGGGCTACA CCGACCCGCG GGCCCTCGCG
TCCCTCGGCC CCGAGCACCT GTTCTCGGAG CCGGGAGAGA TCGCCCGCCT CGCGGCGGGC
GGGGCCGGTC ACATGCCGCG ATTGGCGCCC GGCACGATGC TGGTGCCGCT GCCGCTGCCG
AACGGCTCGT AG
 
Protein sequence
MTRMPARMPA APGPGLVVLD FDGTLADSFA WFCSVLNGVA DRYRFRRVEA HEVEELRLQG 
ARAIVAHLGI PRWKLPLIAR HMHALAARDA AQIALFPGVP AMLDAVAEAG VPLAILSSNR
ADTVRRVLGP DSAARIGTYA CGASIFGKAR RLRALLARTG VPPHRALCIG DEIRDLEAAR
ALGCPFGAVA WGYTDPRALA SLGPEHLFSE PGEIARLAAG GAGHMPRLAP GTMLVPLPLP
NGS