Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_0878 |
Symbol | |
ID | 6136894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010505 |
Strand | - |
Start bp | 921098 |
End bp | 923392 |
Gene Length | 2295 bp |
Protein Length | 764 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641626587 |
Product | 1A family penicillin-binding protein |
Protein accession | YP_001753571 |
Protein GI | 170747311 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.337969 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000893073 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCGCCTGC CGACGTTCAC CGAGATCAAG GTCCGCCTCG AACGCGCCGC CCTCGCCTTC GACGCCTGGG TCAACGCGAG CCTGTACGAC GGCGGCCAGT CGACCGGTCA GGCCTACGAG CGCTTCCAGC GCGTCATGAG CCGCTTCGCG GTGCGCGGCT GGAAGCGCGC CGCCCTCGAC CTGACGAGCG AGGGCGTCAC CATCGGGACC GGCGGCGCCA TCCTGATGCT CGCCCTGGCG CAGCCCGCCT TCCAGCTCAC CAGCGAGAAC TGGCTGAAGC AGCAGGACCT CGCCGTCACC TTCCTGGACC GTTACGGCAC CGAGGTCGGG CGCCGGGGCA TCAAGCACGA CGACTCGCTG AAGCTCGACG AGTTTCCCGA CATCATGATC AAGGCGCTGG TCTCCACGGA GGACCGGCGC TTCTACGAGC ACTGGGGCAT CGACCCGATC GGCACGCTGC GGGCGCTGGT GAACAATTCC CGCGGCGGCA GCGGCACGCA GGGCGGGTCC TCGATCACCC AGCAGCTCGC CAAGAACCTG TTCCTGACGA ACGAGCGCTC CCTGGAGCGG AAGATCAACG AGGCCTTCCT GGCCCTGTGG CTCGAGAGCC ATCTCACCAA GAACGAGATC CTGAAGCTCT ACCTCGACCG CGCGTATATG GGCGGTGGAA CCTTCGGCGC GGTGGCGGCC GCGGATTACT ATTTCGGCAA GCCGCTCAAG GACATCAGCC TTGCGGAGGC CGCCATGCTG GCGGGCCTGT TCAAGGCGCC GACCAAGTAC GCCCCGCACG TCAACCTGCC GGCGGCCCGC GCCCGGGCGG CGGACGTGCT GCACAACATG GTGGAGGCGG GCTTCGTCAC CGAGGGCCAG ATCCAGACGG CGCTGCGCAA CCCGGCGACG CCGGTGACCC GCACCCGCGA CATCACCGCC GACTACTACC TCGACTGGGC CTTCGGCGAG ATCAAGGCGA TGGCCGACGC CGGCAAGCTG CGCAACGACC GCGTGCTGAC CGTGAAGACG CCGCTCGACC TCGCGATCCA GAAGCGCGCC GACGAGGTGG TGGCCGACAT CCTGCGCAAG TCCGGCGACG CCTACGATGT GGACGAGGCC GCCATGGTGA TCCTCGATCC CGACGGGGCG CTGCGCGCCA TGGTGGGCGG CGCCGATTAC GGCGAGAGCC AGTTCAACCG TGCCACCGAC GCGCTGCGCC AGCCCGGCTC CTCGTTCAAG CCCTACGTCT ACTCGGCCGC CCTGAACTCG GGCCTGTTCA AGCCCGACAC GACCGTGGTC GACAGCCCCG TCTGCATCGG CAACTGGTGC CCGCAGAACT ACGGCCGCTC CTATGCCGGC CGGGTGCCGA TGTGGCTCGC GGTGGCCAAG TCGATCAACA CGATCCCGAT CAAGATCTCC ATCGCCCTCG GCAAGGCGAT GGGCATCACC CACGAGGCGA AGGCCGCGAA GGCGGGCCGC GCGAAGATCA TCGAGCTCGC CCACAAGATG GGCATCACCT CGAACCTGAT CGACACGGTC TCGATGCCGA TCGGCTCGGA CGAGGTGACG GTCATCGACC AGGCGGCGGG CTACGCGGTG TTCGCCAACG GCGGCTTCCG CGCCAAGCCC TACGCGGCCA TCGAGGTGAA GAACTCGTCC GGCGAGGTGA TCTACCGCCA CGCCGACGAG GCGCCCGAGC GGGTGCTCGC GCCCCAGGTC GTGGCGGACA TGAACTTCAT GCTCAACAAG GTCGTCGAGG AGGGCACCGG CAAGCGGGCG CAGCTCGAGG GCGTGAAGGT GGCCGGCAAG TCCGGCACGA CGAACGCCTA CCGGGACGCG TGGTTCGTCG GCTACACCGG CAATTACGTC GGCGCCGTCT GGTTCGGCAA CGACGACCAC ACCTCGACCA ACAAGCTCAC CGGCGGCTCC CTCCCGGCCC AGCTCTGGCA CGACGTGATG GAGCCGGCCC ACCAGGGCAT CGAGATCAAG GGTCTGCCCG GCCTGAAGGA GAGCCCGCGC GCCGCCCAGC AGCAGACCTC CGGCGGCCCG ACCGCCCCGA CCGATCCCAA TGCCAGCGCG TACGGCAAGC TCTCCCGCCG CTCCTTCGAG GTGATCAGCG GCCTCAACGG CCTGTTCCGC ACCGTCGAGC GCGCCCCCGG ATCCGCCGCG GACGCGCCCG CCAACGCCGG GGACGCGCCG AAGACGGGCC GGAAGCCCGG CGACCGGGCG GCGGCGCCGT CGGGTCAGCT GCGCGAGGTC GCCGAGGGCG CCCGCCCGGT CGGCGGCTTC ACCGAGGTCC GGTGA
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Protein sequence | MRLPTFTEIK VRLERAALAF DAWVNASLYD GGQSTGQAYE RFQRVMSRFA VRGWKRAALD LTSEGVTIGT GGAILMLALA QPAFQLTSEN WLKQQDLAVT FLDRYGTEVG RRGIKHDDSL KLDEFPDIMI KALVSTEDRR FYEHWGIDPI GTLRALVNNS RGGSGTQGGS SITQQLAKNL FLTNERSLER KINEAFLALW LESHLTKNEI LKLYLDRAYM GGGTFGAVAA ADYYFGKPLK DISLAEAAML AGLFKAPTKY APHVNLPAAR ARAADVLHNM VEAGFVTEGQ IQTALRNPAT PVTRTRDITA DYYLDWAFGE IKAMADAGKL RNDRVLTVKT PLDLAIQKRA DEVVADILRK SGDAYDVDEA AMVILDPDGA LRAMVGGADY GESQFNRATD ALRQPGSSFK PYVYSAALNS GLFKPDTTVV DSPVCIGNWC PQNYGRSYAG RVPMWLAVAK SINTIPIKIS IALGKAMGIT HEAKAAKAGR AKIIELAHKM GITSNLIDTV SMPIGSDEVT VIDQAAGYAV FANGGFRAKP YAAIEVKNSS GEVIYRHADE APERVLAPQV VADMNFMLNK VVEEGTGKRA QLEGVKVAGK SGTTNAYRDA WFVGYTGNYV GAVWFGNDDH TSTNKLTGGS LPAQLWHDVM EPAHQGIEIK GLPGLKESPR AAQQQTSGGP TAPTDPNASA YGKLSRRSFE VISGLNGLFR TVERAPGSAA DAPANAGDAP KTGRKPGDRA AAPSGQLREV AEGARPVGGF TEVR
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