Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_0403 |
Symbol | |
ID | 6136245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010505 |
Strand | - |
Start bp | 445859 |
End bp | 447559 |
Gene Length | 1701 bp |
Protein Length | 566 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641626113 |
Product | bacteriocin/lantibiotic ABC transporter |
Protein accession | YP_001753101 |
Protein GI | 170746841 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.241137 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGCGA CGAAACACAA ACCGCTGACG CTCGCGGAAG CCTGCAGGCT CATCGGCCGT TTCCTCAGGC CGGAGGCCGG TTTCGTCTGG ACTGCGGTCG TCTACGGCAT CGCCGTGGCG CTCCTGGGCC TCGCCGTGCC GGTGTCGGTG CAGCTCCTGA TCAACTCGGT GGCCAACACT GCGCTGCCGG CGCCCCTGTT CGTCCTGTCC GGGCTGCTCC TCGGCCTGCT GCTCGCCGCC GCCCTGCTGA GCGCCGCGCG GATCTATGTT TTGGCGCTGT TCGAGAGGCG CGTGTTCGCG AGAACCGTCG CGGACATCAC CCTGCGCGCC CTCCATGCCA GAAACCCGCA TTTCGACGAT GCACGCCGCG GCGACCTGTT CAATCGCTTC TTCGACCTCA TGACGGTCCA GAAGGCGGTA CCGCATCTTC TGGTCGGCGG CTTTGCGATC CTCCTGCAGT CCGGGATCGG CCTCGTCCTG ACGAGTTTCT ATCATCCGTT CTTCCTCGCC TTTAATCTGG TCGTGGTCGC CGTGCTCGTC GGCATCGCGT TCCTCTGGGC GGCGCCGGCG GTCCGGTCCG GCGCGGCGCT GAGCCATGCC AAGCATGAGA CGGCACGCTG GCTTGAGAGC GTCGGCAGTT CGAACGGCTT CTACAGGCAT GGTGGTCGCC TCACGACCGC GCTTGCCCGT TCCGAGGCTT TGACCGCCAC CTACGCGAGG GTGCATCGCC GCCATTTCCG TCACACCTTC GCACAGACCA TCGGATTCCT CATGGTCTAC GCCATTGCGA GCGCTGGGCT TTTGGCGATG GGTGGGTGGC TCATCCTGCA AGGGCAGTTA TCGCTCGGGC AACTCGTGGC GGCGGAACTC GTCCTGTCGA GCGCCTTCTA TGGGATCTCG CAACTGGGCT CCCACGCGCG GACCTTCTAC GACCTCGTCG CGGCGCTCCA CGAGCTGTCG CTGTTCGAAG AGATCGAGCA GGCCGACGGC GGCGGGGGGA ACGGCCCTGG TCCGGCCGAC GGGAACCTGT GCTTGCGCGA CGTCGAGCAC GATGGCCTGC GCTTCGACTT CGCGGTCGAG CGCGGCGAGA TCCTCGCCGT GGCCGCCGGC GAAGGTGTCG AGCAGGCAAT TGCGGACCTC ATCGAGAGGA GGGTCCGGCC CGTGCGCGGC TGGGTGATGG TCGGGGGAGC CGACATCGCG GCCTTCGGTC CGGAGGGTCT GCAGTCCGAG ATCCTCGTCC TGGATCGGCC GACGCTGCCC GAGACGACCA TCCGCCAGTA CCTGTCGGGC GACGACGAGT CGTGCCTCGC TCGGATGGAC GAGTGCCTAG AACGTGTCGG GCTGGCTGAG CGCATCCGGC GCCTGCCCTC CGGTCTCGAC ACCGCCTTGT CCAAGTCCGG CTTGCCGCTC TCAACGGGCG AGGTCGTCGC CCTAAAGCTG GCCGCCGCCC TCTTGCGGCC GCCAAAGCTC CTCGTCCTGC CGACGCTCCT CGACCTGTTG CCACCGGATC GCATCGGGGC TGCGCTCGCG GGGTTCCGGG AGGCGGGCAC GACGGTGCTG CATGTCACCC GCCGCCCCCC GATGCCGGTT CACGACGACC AGATCCGCCT GGGCGCCCAC GGATACGGGC GCGCGGCCGG ACGTGTGGAC CCGCTCGACA AGACGACGCC GACGGAGAAG CCCCATGCTG TCGCGGCCTG A
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Protein sequence | MDATKHKPLT LAEACRLIGR FLRPEAGFVW TAVVYGIAVA LLGLAVPVSV QLLINSVANT ALPAPLFVLS GLLLGLLLAA ALLSAARIYV LALFERRVFA RTVADITLRA LHARNPHFDD ARRGDLFNRF FDLMTVQKAV PHLLVGGFAI LLQSGIGLVL TSFYHPFFLA FNLVVVAVLV GIAFLWAAPA VRSGAALSHA KHETARWLES VGSSNGFYRH GGRLTTALAR SEALTATYAR VHRRHFRHTF AQTIGFLMVY AIASAGLLAM GGWLILQGQL SLGQLVAAEL VLSSAFYGIS QLGSHARTFY DLVAALHELS LFEEIEQADG GGGNGPGPAD GNLCLRDVEH DGLRFDFAVE RGEILAVAAG EGVEQAIADL IERRVRPVRG WVMVGGADIA AFGPEGLQSE ILVLDRPTLP ETTIRQYLSG DDESCLARMD ECLERVGLAE RIRRLPSGLD TALSKSGLPL STGEVVALKL AAALLRPPKL LVLPTLLDLL PPDRIGAALA GFREAGTTVL HVTRRPPMPV HDDQIRLGAH GYGRAAGRVD PLDKTTPTEK PHAVAA
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