Gene PputW619_4626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4626 
Symbol 
ID6113607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp5110837 
End bp5111691 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content61% 
IMG OID641624432 
Productband 7 protein 
Protein accessionYP_001751475 
Protein GI170723787 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.137042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCC TCATCGTCGT CGGCACACTC GCCGTTTTCG TCCTGATCAC TGTCTTCAAG 
GGTGTACGCA TCGTACCCCA AGGGGAGGAG TGGATCGTCG AGCGCCTGGG CCGCTACCAC
AGCACGCTCA AGCCCGGCCT GAACATCGTC ATCCCTTACA TGGACGTGGT CGCCTACCGC
CTGCCGACCA AGGACATTAT CCTCGACGTG CAGGAGCAGG AAATCATCAC TCGCGACAAT
GCGGTGATCG TCGCCAACGC CCTGTGCTTC GCCAAGGTGG TCGACCCACA GAAGGCCTCC
TATGGCGTGC AGAATTTCTC GTTTGCCGTC ACCAGCCTGA CCATGACATC GTTGCGCGCA
ATCGTCGGCG CCATGGACCT GGACGAAGCG CTGTCCAGCC GCGAGCAGAT CAAGGCACGC
CTGCGAGAGG CGATGTCCGA ACAGACCGAA GACTGGGGTG TGACCGTACG CTCGGTAGAA
ATCCAGGACA TCAAGCCATC GGAAAACATG CAGCTGGCAA TGGAGCGCCA GGCGGCAGCC
GAACGTGAAC GTAAAGCCGA CGTGACCCGT GCAGAAGGTG CCAAGCAGGC CGCCATTCTC
GAGGCCGAAG CCCGCCTGCA GTCGGCCAAG CTCGATGCCG AGGCGCAAAT CAACCTTGCC
GAGGCTTCGG CAAAGGCAAT TTCGCTGGTC AAGGACGCGG TAGGCAACGA GACGGTGCCA
GCCATGTACC TGCTGGGAGA GCGCTATGTC GGCGCCATGG AGAACCTGGC CAGCAGCAAC
AACGCCAAAG TGGTGGTGCT GCCGGCTGAT TTGCAGGAAA CCGTACGTGG CTTGATGGGC
CGCAACAAGG CTTGA
 
Protein sequence
MTSLIVVGTL AVFVLITVFK GVRIVPQGEE WIVERLGRYH STLKPGLNIV IPYMDVVAYR 
LPTKDIILDV QEQEIITRDN AVIVANALCF AKVVDPQKAS YGVQNFSFAV TSLTMTSLRA
IVGAMDLDEA LSSREQIKAR LREAMSEQTE DWGVTVRSVE IQDIKPSENM QLAMERQAAA
ERERKADVTR AEGAKQAAIL EAEARLQSAK LDAEAQINLA EASAKAISLV KDAVGNETVP
AMYLLGERYV GAMENLASSN NAKVVVLPAD LQETVRGLMG RNKA