| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4616 |
|---|
| Symbol | |
|---|
| ID | 6113597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 5101943 |
|---|
| End bp | 5103634 |
|---|
| Gene Length | 1692 bp |
|---|
| Protein Length | 563 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641624422 |
|---|
| Product | precorrin-3B C17-methyltransferase |
|---|
| Protein accession | YP_001751465 |
|---|
| Protein GI | 170723777 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1010] Precorrin-3B methylase
[COG2073] Cobalamin biosynthesis protein CbiG |
|---|
| TIGRFAM ID | [TIGR01466] precorrin-3B C17-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.542511 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACAAGG CACCGGCAAT CATCGTGCTC GGCGCTGGCA GCGTGGCCAC CGCGCGGCGC
ATTCAGCAGC ATTATCCACA GGCGACGATC CATGGCCTGA GCGGCCGGGT CGAGCTGGCC
GACCAGTATT ACGAGGCATT TGGCGACACG CTGCGCGCCC TTTATCTGCA AGACACGCCG
ATCATAGCCC TGTGTGCGGC GGGTATCGTC ATCCGTAGCC TGGCCAGCCT GCTTTGCGAG
AAAGGCGCAG AGCCGCCGGT GCTGGCGGTT GCCGAGGACG GCAGTGCGGT AGTGCCGCTG
CTTGGCGGGC TGAGCGGCGT CAATGTCATG GCTCGCGAGA TCGGTGAGGC GCTGGGCGTG
GCGGCGGCGA TCACCACCAG CGGCGAGCTG CGTTTCGGCA CCTGCCTGTT GAACCCACCC
GAGGGCTACG CCCTGGCGGA TATCGAACAG GGCAAGCGTT TCGTCTCCGA TCTGTTGGCG
GGGGAGGCCG TACGTATCGA GGGCGATGCG CCTTGGCTGG CTCAGGCCCA ATTGCCGGCC
AGTGAAGCCG CCCAGCGCAC CATTCATGTG GGATGCACTG CGCGCCCGGC CAGCCGTGAC
GAGTTGCTGA TCCACCCTCG TTCGGTGGTG GTTGTGGTGG ATGCGGGCGG TCCTGATCTG
GTTGAACGCG TCAGCGATGC CCTGCGTGAA GCGGGCATCG CCGAGCAGTC ACTGGCGTGC
CTGCTGGTTG CCGAACAGGC CATGGCCGAA CCGTCCTTGC AGGCAGCGGC CAAGGTGCTG
GGTGTCGCAC TGCGTTTTGC TGCCAAAGAA AGCACTCTTG TCAGCATGGC CGCCGAAGCA
CTGCCGGATG CGCGTCTGAT CGAGCAGACG GGCCTGGTCA TTGCGCTGTC ACCAGTGCCT
GTCAAGGTCA ACCACCTGGG CCGCAGGCGT GGTCGCTTGG CCGTCATCGG CCTTGGCCCT
GGCGCCGCCG AGTTGATGGT GCCGGCGGTC AAAGCCGAGC TGGCGCGCGC CGAGGATATT
CTCGGTTACG AAACCTACGT GCGCATGGCC GGGCCGTTCC GCGACGACCA GGTGCAACAT
TGCACCGACA ATCGTGAAGA AATGCAGCGC GCGCGTCATG CTTTCGAGCT CGCCGCACAA
GGACGCTCGG TGGTGGTGGT TTCTTCGGGT GACCCGGGGG TATTCGCCAT GGCTGCAGCC
GTGCTGGAAG CGCTGCACGG GTCCACTGAC CCCGCTTGGC ATCGTGTCGA GCTGGAAATC
CTGCCGGGGG TTTCGGCCTC GCTGGCCACT GCCGCTCAAG CGGGCGCGCC GCTGGGGCAT
GACTTCTGCG TGATGTCGCT ATCGGACAAC CTCAAACCGT GGTCGACCAT TGAGCATCGG
CTGGACCTGG CGGCCCAGGC CGACCTGGTG CTGGCCTTCT ACAACCCGAT CTCGCGTTCG
CGCCCCTGGC AGCTTGGGCG CGCGCTGGAG ATCGTGCGCC AGCACCGGGA TGGTAATACA
CCCGTGGTGC TTGGGCGTGA CATCGGCAGG CCGGGGCAGA CGCTCAGGGT GGTCACCCTC
GCCGAGCTGA CGCCAGAGAT GGTCGACATG CGTACCATGG TCCTGGTCGG TTCTTCCACG
ACCTGCACCT TTGCCCGTGC CGAGGGTGGG CAGTGGGTCT ATACCCCGCG CTGGTATCCT
GTTGCGCCCT GA
|
|---|
| Protein sequence | MHKAPAIIVL GAGSVATARR IQQHYPQATI HGLSGRVELA DQYYEAFGDT LRALYLQDTP
IIALCAAGIV IRSLASLLCE KGAEPPVLAV AEDGSAVVPL LGGLSGVNVM AREIGEALGV
AAAITTSGEL RFGTCLLNPP EGYALADIEQ GKRFVSDLLA GEAVRIEGDA PWLAQAQLPA
SEAAQRTIHV GCTARPASRD ELLIHPRSVV VVVDAGGPDL VERVSDALRE AGIAEQSLAC
LLVAEQAMAE PSLQAAAKVL GVALRFAAKE STLVSMAAEA LPDARLIEQT GLVIALSPVP
VKVNHLGRRR GRLAVIGLGP GAAELMVPAV KAELARAEDI LGYETYVRMA GPFRDDQVQH
CTDNREEMQR ARHAFELAAQ GRSVVVVSSG DPGVFAMAAA VLEALHGSTD PAWHRVELEI
LPGVSASLAT AAQAGAPLGH DFCVMSLSDN LKPWSTIEHR LDLAAQADLV LAFYNPISRS
RPWQLGRALE IVRQHRDGNT PVVLGRDIGR PGQTLRVVTL AELTPEMVDM RTMVLVGSST
TCTFARAEGG QWVYTPRWYP VAP
|
|---|
| |