| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4404 |
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| Symbol | |
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| ID | 6113374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4864218 |
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| End bp | 4865048 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641624199 |
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| Product | signaling modulator of AmpD, AmpE |
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| Protein accession | YP_001751253 |
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| Protein GI | 170723565 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3725] Membrane protein required for beta-lactamase induction |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.154037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTTC TGGTGTTGAT ACTGGCGTTG TGGGTCGAGA AGTTCTCCGC CCTGCGCCAT
CAGGTACAGC GCGATGGCTT CTTCCTGGGC GAGCTGGTGC GCCTGGAGCG CAGCGGGAGG
GTGCATCCCT GGTGGAGCCT GGCCATCCTG GTGCTTGCAC CCGTGGCAGT GCTGGTGTTG
CTGCTGCACG TGCTCGACCC GGTGGCCTAT GGTTTGCTGG CCCTGCCGGT GCACCTGCTG
GTGCTGATCT ACAGCCTCGG CCGTGGCGAT GCCAAGGCCG CCCTTGGGCC GTTTCGCGAT
GCCTGGCGGC GCGGCGACGA CCAGGCCGCG CTGCATGTGG CCGAGCGCGA CCTGGGCCTG
GTAGCTGATG AACCCCAGGC TTTGCTGGTG CGCGTGCAAG GCTACCTGTT GTGGCAGGCC
TATCAGAGTT TCTTCGCCGT GATCTTCTGG TACTTCGTGC TCGGCCCCGG GGCGGCGCTG
GCCTATCGCC TGCTGGCGCT GACAGGCGAT AACAGTTGCC AACCTGCACT CAAGGCCCGG
GCCGAGCAGC TGCGGCACAT CATGGACTGG CTTCCGGTGC GCGTGTTGGC CCTGAGTTTC
GCCCTCGTCG GCAATTTCGT CGCAGTGACC CGCGTGATGC TGCACGAACT GCTCAACTGG
CACATCAGCG CCGGTCACCT GGTGGCCAGG GTCGGGCGGG TTGCCGATGA CATTCCCGAC
CAAGAGGACA GCCAGCGCGG TCTGGCTAGG CTCGATAGCC TGTGGGAGCT GCTGCTGCGC
TGTGCGGTGC TGTGGTATGC GGGCTTTGCG TTGTGGACGG TGCTGGTCTG A
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| Protein sequence | MSFLVLILAL WVEKFSALRH QVQRDGFFLG ELVRLERSGR VHPWWSLAIL VLAPVAVLVL
LLHVLDPVAY GLLALPVHLL VLIYSLGRGD AKAALGPFRD AWRRGDDQAA LHVAERDLGL
VADEPQALLV RVQGYLLWQA YQSFFAVIFW YFVLGPGAAL AYRLLALTGD NSCQPALKAR
AEQLRHIMDW LPVRVLALSF ALVGNFVAVT RVMLHELLNW HISAGHLVAR VGRVADDIPD
QEDSQRGLAR LDSLWELLLR CAVLWYAGFA LWTVLV
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